Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97952g00001 ATGAAAATCTACAACCAGGGGCGTCTTGTTCTTCAAGATGGAAATATCTATGACGGATTATGGCACAGTGGCAAGAGATCAGGTCCAGGAACATTCTATTTCAAGAACGGAGATATGTTTCAAGGATCGTGGAGGGATGATGTCATGCACGGCAAG 156 0.4423 MKIYNQGRLVLQDGNIYDGLWHSGKRSGPGTFYFKNGDMFQGSWRDDVMHGK 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97952g00001 52 Pfam MORN repeat 17 39 IPR003409 -
Trme97952g00001 52 Pfam MORN repeat 40 52 IPR003409 -
Trme97952g00001 52 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 6 52 - -
Trme97952g00001 52 Gene3D - 2 52 - -
Trme97952g00001 52 SMART morn 15 36 IPR003409 -
Trme97952g00001 52 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 7 52 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97952g00001 6 52 PP2C-type Phosphatase Gene Family AT1G75010 76.596 5.59e-24 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97952g00001 - - gsj:114371951 94.7449