Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9794g00001 ATGCCTCAAATGATCCTTCTTGCGACGAATATTAGTAACAATGAATTCGATAAAGCTAAATCCGCGGGTTTTAGCGATACGGTGATTATGAAGCCGCTTAGAGCCAGTATGGTGGGAGCTTGTCTTCAGCAAGTTTTGGGGACTGGCAAGAAGAGACAGTTAGGAAAAGAGATGCCTAACGGTTCGACTTCAGTTCGAAGCCTTCTTTATGGAAAGAAAATTTTAGTGGTTGATGACAATGTAGTGAACCGGAGAGTGGCTGCAGGTGCATTGAAAATTTTTGGAGCTGATGTGAAGTGTGCAGATAGTGGCAAAGCTGCTCTTGAAATGCTTCAATTCCCTCACAATTTTGATGCTTGCTTCATGGACATCCAAATGCCAGAAATGGACGGGTTTGAAGCGACTCGTCGAATTCGCGAGATGGAGAGGACGGCAAATGAGGAGACGAATGGTGAATGTGGTGAAGGGAAAATCGAGTTCCATTTACCTATATTGGCCATGACAGCAGATGTAATACATGCAACATACGAAGAGTGTTTGAAATGTGGAATGGATGGTTATGTCTCAAAACCTTTCGAGGAAGAAAATCTTTATCAAGCAGTTGCAAAGTTTTTCGAGACCAAGCCTACTACTACCACAATAGTAAACTCRTGA 654 0.4266 MPQMILLATNISNNEFDKAKSAGFSDTVIMKPLRASMVGACLQQVLGTGKKRQLGKEMPNGSTSVRSLLYGKKILVVDDNVVNRRVAAGALKIFGADVKCADSGKAALEMLQFPHNFDACFMDIQMPEMDGFEATRRIREMERTANEETNGECGEGKIEFHLPILAMTADVIHATYEECLKCGMDGYVSKPFEEENLYQAVAKFFETKPTTTTIVNS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9794g00001 217 FunFam Histidine kinase 3 67 209 - -
Trme9794g00001 217 Pfam Response regulator receiver domain 74 201 IPR001789 GO:0000160
Trme9794g00001 217 SUPERFAMILY CheY-like 71 206 IPR011006 -
Trme9794g00001 217 CDD REC_hyHK_CKI1_RcsC-like 74 201 - -
Trme9794g00001 217 SMART REC_2 72 201 IPR001789 GO:0000160
Trme9794g00001 217 ProSiteProfiles Response regulatory domain profile. 73 205 IPR001789 GO:0000160
Trme9794g00001 217 Gene3D - 67 212 - -
Trme9794g00001 217 PANTHER TWO-COMPONENT HISTIDINE KINASE 2 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9794g00001 Trme-Chr9794 577 1587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9794g00001 2 213 Histidine Kinase Gene Family AT2G01830 69.626 3.20e-99 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trme9794g00001 Response_reg 9.8e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9794g00001 K14489 - gmx:100818481 349.362