LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme97893g00001	AATGAGCGTGAGCTGAAACGTGAGAGGAGGAAACAATCAAATCGTGAATCTGCTAGGAGGTCAAGACTAAGGAAGCAGGCTGAGGCCGAAGAACTGGCACGAAAAGTTGAATCCTTAAATGCTGAGAGTGCGTCACTTAAATCAGAAATAAACCGACTTGCTGAGAGTTCTGAAAAACTGAGGATGGAAAATGCTGCATTGAAGGAAAAATTCAAAATTGCTCAACTAGGACAACCAAAAGAGATTATTTTAAGCAGCATTGACAGCCAGAGGATTACACCT	282	0.4184	NERELKRERRKQSNRESARRSRLRKQAEAEELARKVESLNAESASLKSEINRLAESSEKLRMENAALKEKFKIAQLGQPKEIILSSIDSQRITP	94

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme97893g00001	94	MobiDBLite	consensus disorder prediction	1	26	-	-
	Trme97893g00001	94	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	1	81	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Trme97893g00001	94	CDD	bZIP_plant_GBF1	7	55	IPR045314	GO:0003700\|GO:0006355
	Trme97893g00001	94	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	9	24	IPR004827	GO:0003700\|GO:0006355
	Trme97893g00001	94	SMART	brlzneu	2	66	IPR004827	GO:0003700\|GO:0006355
	Trme97893g00001	94	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	4	67	IPR004827	GO:0003700\|GO:0006355
	Trme97893g00001	94	Pfam	bZIP transcription factor	2	64	IPR004827	GO:0003700\|GO:0006355
	Trme97893g00001	94	SUPERFAMILY	Leucine zipper domain	5	61	IPR046347	GO:0003700\|GO:0006355
	Trme97893g00001	94	Coils	Coil	15	70	-	-
	Trme97893g00001	94	Gene3D	-	5	77	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme97893g00001	1	75	bZIP Transcription Factor Family	AT2G46270	72.000	2.45e-28	102

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Trme97893g00001		bZIP_1	1.2e-19	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme97893g00001	K09060		-	gmx:778133	144.821