Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97792g00001 GGTAACATTGCTCATCATGTTGCGGTGAGGGCTGCTGAGGAAGATGTCGAGGTACTAGGTAATATTCTTCTCCATCCACTTTTCGGTGGGGAGAAGCGTACGGAATCAGAGAAGAAACTGGATGGAAAGTATTTCGTGAAGTTGCAAGATCGCGATTGGTATTGGAGAGCTTTTCTACCTGAAGGGGAAGATAGAGATCACCATGCTTGTAATCCATTTGGACCTAAAGGTAAAAGCCTTAAAGGACTTAAGTTCCCTAAAAGCCTTGTTTGTGTGGCCGGTTTGGATCTTCTACAAGATTGGCAATTGGAATATGCCGAAGGTCTCAAGAATTATGACCATGATGTCAAACTTCTTTACCTAAAGGAAGCTACTATTGGTTTCTACTTCTTGCCTAATAATGATCATTTCTATTGCCTCATGAATGAGATAAACGCCTTCGTGCATCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNCTACTACTACTACTTAA 504 0.3849 GNIAHHVAVRAAEEDVEVLGNILLHPLFGGEKRTESEKKLDGKYFVKLQDRDWYWRAFLPEGEDRDHHACNPFGPKGKSLKGLKFPKSLVCVAGLDLLQDWQLEYAEGLKNYDHDVKLLYLKEATIGFYFLPNNDHFYCLMNEINAFVHXXXXXXXXXXXXXXTTTT 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97792g00001 167 PANTHER ARYLACETAMIDE DEACETYLASE 1 123 - -
Trme97792g00001 167 Gene3D alpha/beta hydrolase 1 150 IPR029058 -
Trme97792g00001 167 SUPERFAMILY alpha/beta-Hydrolases 1 147 IPR029058 -
Trme97792g00001 167 Pfam alpha/beta hydrolase fold 1 129 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme97792g00001 Trme-Chr97792 1 504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97792g00001 1 149 Carbohydrate Esterase AT3G63010 77.181 9.29e-86 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97792g00001 K14493 - gmx:100812133 268.855