Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9766g00001 AGTGAAGCTGAACTAGTGCAGCAAATTATTGAGGATGTTTTGGCAAAACTAGACAGCACATTCTTGTCTATTACCGAATTTCCAGTTGGATTGGAATCTCGCGTGCAAAAAGTTATTGAATTCATTGCAACTCAGCCAAGCAAAGTTTGTATGATAGGGATATGGGGAATGGGTGGGTCGGGTAAAACAACCATAGCCAAAGCCATCTACAATCAAATTCATCGCAAATTTTTGAGTAGAAGTTTCATTGAAAATGTTAGAGAAGTTTGTGAAAAGGAAAATAGAGGGATTATTCATTTACAAAAACAACTTCTTTTAGATATCCTAAACACAAAGCAGAAGATACATAGCCCTGCATTGGGGACAACTAAGATCGAGAAAAGATTTCAGGGGAAAAAAGTACTTGTTGTTCTTGATGATGTGACCACATTGGAACAGTTAAAAGCGTTATGTGGAAATCCTAAATTGTTTGGTCCGGGAAGTGTATTTATTGTTACAACTAGAGACGCACGCCTGCTTAATTTAGTTAAGGTAGACTATGTCTGTACAATGAAGGAAATGGAAGAAAAAGACCCCCTTGAGCTTTTCAGTTGGCATGCTTTTAGACAACCTAGTCCAATAAAAGACTTCAGTGAACTCTCGAGGAACATAGTTGCTTATTGTGGAGGATTACCACTGGCTCTTGAAGTCATTGGTTCTTACTTATACGAGAGGACACAACAAGAATGGAAAAGTGTACTCTTGAAATTAGAGAGAATTCCCAATGATCAAGTGCAAGAGAAACTGAGAATAAGCTATGATGGTTTAAAGGATGATATGGCAAAGGATATATTTCTTGATATATGTTGTTTCTTTATCGGCAAGGATAGAGCCTATGTTACTGAGATACTAAATGGTTGTGGACTTTATGCTGACATTGGAATAACGGTCCTTGTAGAGNNGAGCCTTGTAAAAATTGAAAAGAATAACAAGCTTGGAATGCATGATTTGCTAAGAGACATGGGAAGAGAAATTGTTCGCCAAAGTTCACCAAAAAATCCAGGGAAGCGTAGTCGATTGTGGTTTCACGAGGATGTACATGATGTTTTGACAAAAAATATGGTAAGACCTTCCTTTGTATAG 1122 0.3743 SEAELVQQIIEDVLAKLDSTFLSITEFPVGLESRVQKVIEFIATQPSKVCMIGIWGMGGSGKTTIAKAIYNQIHRKFLSRSFIENVREVCEKENRGIIHLQKQLLLDILNTKQKIHSPALGTTKIEKRFQGKKVLVVLDDVTTLEQLKALCGNPKLFGPGSVFIVTTRDARLLNLVKVDYVCTMKEMEEKDPLELFSWHAFRQPSPIKDFSELSRNIVAYCGGLPLALEVIGSYLYERTQQEWKSVLLKLERIPNDQVQEKLRISYDGLKDDMAKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGITVLVEXSLVKIEKNNKLGMHDLLRDMGREIVRQSSPKNPGKRSRLWFHEDVHDVLTKNMVRPSFV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9766g00001 373 Gene3D - 10 181 IPR027417 -
Trme9766g00001 373 PRINTS Disease resistance protein signature 51 66 - -
Trme9766g00001 373 PRINTS Disease resistance protein signature 128 142 - -
Trme9766g00001 373 PRINTS Disease resistance protein signature 221 235 - -
Trme9766g00001 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 281 IPR027417 -
Trme9766g00001 373 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 363 IPR044974 GO:0006952
Trme9766g00001 373 SUPERFAMILY "Winged helix" DNA-binding domain 257 363 IPR036390 -
Trme9766g00001 373 Pfam NB-ARC domain 32 260 IPR002182 GO:0043531
Trme9766g00001 373 Gene3D - 186 270 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9766g00001 Trme-Chr9766 367 1488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9766g00001 29 354 WRKY Transcription Factor Family AT5G45050 35.045 1.09e-55 195