Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97652g00001 TTCGTGACACCATTTCTTGAAGGGCTTATGAAGATTGTTGCAAGGGTTACATATGTCTTGGCCGATGAGCCTGATGCCGTTGCACTTTGCCGTGATCAAAATCTTGCTGCACTCTTCATTGAACTCCTACAGACCAATGGGCTTGATAATGTACAGATGGTTTCTGCTATAGCTTTGGAGAATTTATCCCTAGAATCAAAGAATTTAACCAAATTGCCCGAGGTGCCAGAACCGACCTTTTGTGCTTCATTCTTCTCGTGTTTCAGTCAACCGCCAGTGGTTACTGGGTTATGTAGGATCCACTGTGGGAAGTGTTCTTTAAAAGAAACATTTTGCCTTTACGAAGGACAGGCGGTCCTTAAGTTAGTAGCTCTAATGGACCACACAAATGTGAATGTAGTTGAGGCAGCACTTGCAGCCTTATGTACTGCAATAGATGATGGAGTAGATATTGAGCAAGGTGCAATGGTTTTGTGTGAAGCAGAGGGAGTGAAGCCTATACTTGACGTGTTACTTGAGAAACGAACAGACAATTTGAGGAGAAGGGCCGTTTGGGCAGTTGAGAGATTGTTGCGAACGGACGATATAGCCTACGAAGTTTCTGGTGATCAAACTGTGAGTAATGCACTTGTGGATGCTTTCCAACACGGTGATTATCGAACTAGGCAGATTGCTGAGCGTGCCCTCAAGCATGTTGAT 699 0.4435 FVTPFLEGLMKIVARVTYVLADEPDAVALCRDQNLAALFIELLQTNGLDNVQMVSAIALENLSLESKNLTKLPEVPEPTFCASFFSCFSQPPVVTGLCRIHCGKCSLKETFCLYEGQAVLKLVALMDHTNVNVVEAALAALCTAIDDGVDIEQGAMVLCEAEGVKPILDVLLEKRTDNLRRRAVWAVERLLRTDDIAYEVSGDQTVSNALVDAFQHGDYRTRQIAERALKHVD 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97652g00001 233 Gene3D - 9 232 IPR011989 -
Trme97652g00001 233 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 233 - -
Trme97652g00001 233 SUPERFAMILY ARM repeat 20 231 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97652g00001 1 233 U-box Gene Family AT1G76390 60.944 4.51e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97652g00001 - - gmx:100789746 394.045