Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97621g00001 ATGTCTGAGATGAATGAACCAAATTCAGAGAAAGTTTGTGAAACTATTGCCGAACCGAATTCAGAGAAAGTTTGTGAAACTAGTGGTGAATCTCCAACTACACCAGTTGGAAAACAAGCAGAAGAAGCTGAACCAAAAAGTGGTGAAAGAATCAAAGCTACAAGACACCCTAGATGGACAAGACAAGAAACACTTGTTCTAATTGAGGCAAAGAAAGTGATTGAAAATGGAGATCAAGTTTGTAGATACAGATCATCAACATCAGGGTTGGTTCAAACCGACCCGAAATGGGATTTGGTTTCATCATTGTGTCAACAACATGGTGTCAAAAGAGGAGCTGTTCAGTGTAGGAAAAGATGGGGAAATCTTCTAACTGATTTCAGGAAGATCAAGAAATGGGAGACAAATAT 410 0.3878 MSEMNEPNSEKVCETIAEPNSEKVCETSGESPTTPVGKQAEEAEPKSGERIKATRHPRWTRQETLVLIEAKKVIENGDQVCRYRSSTSGLVQTDPKWDLVSSLCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWETN 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97621g00001 136 Gene3D - 59 129 - -
Trme97621g00001 136 SUPERFAMILY Homeodomain-like 55 126 IPR009057 -
Trme97621g00001 136 MobiDBLite consensus disorder prediction 21 35 - -
Trme97621g00001 136 ProSiteProfiles Myb-like domain profile. 58 124 IPR001005 -
Trme97621g00001 136 Pfam Myb/SANT-like DNA-binding domain 57 134 IPR044822 -
Trme97621g00001 136 MobiDBLite consensus disorder prediction 42 56 - -
Trme97621g00001 136 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 29 135 - -
Trme97621g00001 136 MobiDBLite consensus disorder prediction 1 56 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97621g00001 58 131 Trihelix Transcription Factor Family AT5G03680 33.333 3.73e-07 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trme97621g00001 Myb_DNA-bind_4 5.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97621g00001 - - tpra:123916032 278.1