Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97541g00001 ATGGCTTCCTCAGCAGACAACAATGGAGACAAGGTAATAGTCCACAACCTGCTCCCCCACATAGTTGTCTATAGTGACGGTACCATAGATCGTCCAAGAAACTTTCCGATTGTTCCACCACAAGAAGAGGACCCTGAAACCGGTGTCTCATCGAAAGACATTGTCTTTTCCAATGACCCTTACCTCACTGCTAGACTTTTTCTTCCAAAACTAACACAAACCAATGATCAGAACCAAAAACTCACCATCTTGGTTTATTTTCATGGTGGTGGATTCACCTTTGAATCAGCCTATTCAAACATCCACCACGCATATTGCAATCTCATAGCTTCTCAAGCAAATGCTGTGATTGCTACCATAGAACATAGAAAGGCTCCAGAGTATTATCTTCCTACAGCTTATAATGATTGTTGGGCTGGTCTCTGTTGGGTTGCTTCTCATGCAACTAAAAATCCCATAAACAGTGACCCTTGGATCGCCAATCATGGTGATTTTAACAGAATTTTCATTGGTGGTGATAGTAGTGGTGGCAACCTTGCTCACAATGTTGCTATGCGTGCTGGTGTTGAAGCTTTACCTGGTGG 584 0.4298 MASSADNNGDKVIVHNLLPHIVVYSDGTIDRPRNFPIVPPQEEDPETGVSSKDIVFSNDPYLTARLFLPKLTQTNDQNQKLTILVYFHGGGFTFESAYSNIHHAYCNLIASQANAVIATIEHRKAPEYYLPTAYNDCWAGLCWVASHATKNPINSDPWIANHGDFNRIFIGGDSSGGNLAHNVAMRAGVEALPGG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97541g00001 195 PANTHER ARYLACETAMIDE DEACETYLASE 19 186 - -
Trme97541g00001 195 Gene3D alpha/beta hydrolase 18 195 IPR029058 -
Trme97541g00001 195 Pfam alpha/beta hydrolase fold 84 189 IPR013094 GO:0016787
Trme97541g00001 195 SUPERFAMILY alpha/beta-Hydrolases 19 192 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme97541g00001 Trme-Chr97541 117 700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97541g00001 10 195 Carbohydrate Esterase AT3G48690 38.710 2.15e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97541g00001 - K13258 gmx:100814777 253.062