Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme975027g00001 CCATCTTCTGTTGTCAGTCCCCGCCCTCGAGGGCGTCCACCGGGATCTAAGAATAAGCTCAAGATTCCTATCGTAGAAACACATGTCAACCGCAATGTACTCAGTTCTCATGTGCTTGATATCACTCATGGTGCCGATTTGTCAACAAGTCTCTTGGATTATGTTTACGATTCGATTGCCGATTCTTAA 189 0.455 PSSVVSPRPRGRPPGSKNKLKIPIVETHVNRNVLSSHVLDITHGADLSTSLLDYVYDSIADS 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme975027g00001 62 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 54 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme975027g00001 Trme-Chr975027 1 189 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme975027g00001 2 55 AT-hook Motif Nuclear Localized (AHL) Family AT1G20900 53.704 5.94e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme975027g00001 - - peq:110018030 62.3882