Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97478g00001 ATGCAGGGGTACGATACAAAAGTAGGGGAGAGAGGGATTCAACTTTCTGGAGGACAGAAGCAGCGTGTGGCAATTGCGAGAGCCATAGTTAACAGTCCAAGAATATTACTACTAGATGAAGCCACAAGTGCACTTGATGCT 141 0.461 MQGYDTKVGERGIQLSGGQKQRVAIARAIVNSPRILLLDEATSALDA 47
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97478g00001 47 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 47 IPR027417 -
Trme97478g00001 47 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 2 47 IPR039421 -
Trme97478g00001 47 Pfam ABC transporter 5 43 IPR003439 GO:0005524
Trme97478g00001 47 Gene3D - 2 47 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme97478g00001 Trme-Chr97478 1 141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97478g00001 3 47 Calmodulin-binding Proteins AT2G36910 77.778 1.98e-19 77.0