Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97356g00001 ATGAGGAGCACAACCGGAGGAGAGATAGTTCAAGTAGAAGGAGGGCACATAGTTCGATCCACCGGTAAAAAAGATCGACACAGCAAGGTTTACACGTCAAAAGGACCTCGTGATCGTAGGGTTCGTCTCTCAGCACACACAGCAATCGAATTCTACGATGTTCAAGATCGCCTTGGCTACGACAGACCAAGTAAAGCAGTGGACTGGCTCATCAAGAAAGCAAAGTCTTCCATTGACAAACTCGCCAAGCTTCCTCCATGGCATCCGATCGGCGAAAATCAAACACTAAAACCTCAAGAAGAGCAGAATGCATCTGCAGACACAACTG 328 0.4756 MRSTTGGEIVQVEGGHIVRSTGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAKLPPWHPIGENQTLKPQEEQNASADTT 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97356g00001 109 ProSiteProfiles TCP domain profile. 23 81 IPR017887 -
Trme97356g00001 109 Pfam TCP family transcription factor 21 97 IPR017887 -
Trme97356g00001 109 MobiDBLite consensus disorder prediction 95 109 - -
Trme97356g00001 109 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 103 IPR005333 GO:0003700
Trme97356g00001 109 MobiDBLite consensus disorder prediction 1 39 - -
Trme97356g00001 109 MobiDBLite consensus disorder prediction 84 109 - -
Trme97356g00001 109 MobiDBLite consensus disorder prediction 18 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme97356g00001 Trme-Chr97356 158 485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97356g00001 7 89 TCP Transcription Factor Family AT3G15030 86.747 3.20e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trme97356g00001 TCP 2.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97356g00001 - - jre:108993883 178.333