Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9733g00001 ATGGGTTTGCTTTTGAATTATTCTCAGGCCGGTTTTGATGTTAAAGATGTGTTTCTTCACATCAAGCTGATTGAGCAAACATTGGAAGATTCGCAGGCTGCAATTTTGATTGAAGAAGAGTGTGACGGTGAAATGCAGCTTCAAGGGTCTTTGTTCAAGTTGACATTTGCTTGTAACTCTCCAATTTCGTGGCCTGCAATGTCGAGTGCGTTGGATAGTTCCTCCATTTGCTGCAAGAAGATTCAGATCTTTGAGAAGAAAGGTCTCACCCTTGGAATTGTACTTTTACTTGTTCTCTCTGGGGCTGGACAAGATAAGTTGGTAAGGACTCGAGTTGAAAGTGCTCTCAAGTTTGCCATGAAGAAGCCTAAAGCAAGTGTTGTGAAGCTTCCTTTTGGGCTTTGTGGATGTCAAGAGGAGAATTTCAAGGGGAGAGAATTTGGTGAGATTGAAGAGAATTGTAGCGGTGTATACTGCGGAAACGGATTTGAGAATTTGAGCCAAAAGATTCATCTCGAAATGCCATTGCCTAATTCATTGTTTCATGTATCGGTAGACGAGTGGCAGACTATTCTGACAGATGCCGATGANNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGACACAATTCGTATAAAGGAGCCTACATGGGGAAAAAAGTTGGCATTGAGAAGCTCAGAGGGTGCGACAAAGGGAACTCGTATGAGTTTGTGCTCAGGAAAGATCTGCTAGAATTGATGACGTGCGGACATAAAAATATTCTGCAGTTTTGTGGTGTTTGTGTAGATGACAATCACGGGTTATGCGTAGTGACGAAATTCATGGAAGGTGGATCTGTCCATGACTTGATTTCAAAGAACAAGAAACTTCAGAGCAAGGATATTGTAAGAATTGCAGTTGATGTGGCTGAGGGGATCAAGTTTATGAATGATCACGGTGTTGCGTATAGAGACCTTAATACTCAGAGGATTATGTTGGATAAACATGGGAGTGCTTGCTTGGGAGATTTGGGTATAGTCACTGCCTGCAAGAGCAACCAAGAAGCAATGGACTATGAAACTGACGGTTACCGGTGGTTAGCTCCAGAGGTACGATTCTAA 1122 0.4055 MGLLLNYSQAGFDVKDVFLHIKLIEQTLEDSQAAILIEEECDGEMQLQGSLFKLTFACNSPISWPAMSSALDSSSICCKKIQIFEKKGLTLGIVLLLVLSGAGQDKLVRTRVESALKFAMKKPKASVVKLPFGLCGCQEENFKGREFGEIEENCSGVYCGNGFENLSQKIHLEMPLPNSLFHVSVDEWQTILTDADXXXXXXXXXXXXXXXXXXXHNSYKGAYMGKKVGIEKLRGCDKGNSYEFVLRKDLLELMTCGHKNILQFCGVCVDDNHGLCVVTKFMEGGSVHDLISKNKKLQSKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRIMLDKHGSACLGDLGIVTACKSNQEAMDYETDGYRWLAPEVRF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9733g00001 373 ProSiteProfiles Protein kinase domain profile. 197 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme9733g00001 373 SMART tyrkin_6 219 373 IPR020635 GO:0004713|GO:0006468
Trme9733g00001 373 SUPERFAMILY Protein kinase-like (PK-like) 225 371 IPR011009 -
Trme9733g00001 373 Gene3D Transferase(Phosphotransferase) domain 1 217 372 - -
Trme9733g00001 373 Pfam Protein tyrosine and serine/threonine kinase 248 371 IPR001245 GO:0004672|GO:0006468
Trme9733g00001 373 Coils Coil 195 196 - -
Trme9733g00001 373 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 219 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9733g00001 Trme-Chr9733 342 1710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9733g00001 219 371 MAP Kinase Kinase Kinase AT2G17700 33.333 4.78e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Trme9733g00001 PK_Tyr_Ser-Thr 2.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9733g00001 - - gmx:100819097 573.163