Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97332g00001 ATGACTAGCAAATACGACGGACACGCCGTGGGAATAGACCTTGGAACAACTTATTCTTGTGTTGCTGTTTGGTTGGAGCAAAATAATAGAGTTGAAATTATCCACAATGATGAAGGCAATAAAATCACACCTTCTTTTGTTGCTTTCACTGATCATCAAAGGTTGGTGGGTGGTGCTGCTAAGGATCAAGCTGCTATCAACCCAGAGAACACTGTCTTTGTCGCTTTGCGATTCTTTATATTATGGAGAATCACAGTCAAATGTGATTGA 270 0.4037 MTSKYDGHAVGIDLGTTYSCVAVWLEQNNRVEIIHNDEGNKITPSFVAFTDHQRLVGGAAKDQAAINPENTVFVALRFFILWRITVKCD 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97332g00001 89 PRINTS 70kDa heat shock protein signature 8 21 - -
Trme97332g00001 89 PRINTS 70kDa heat shock protein signature 38 50 - -
Trme97332g00001 89 PRINTS 70kDa heat shock protein signature 60 68 - -
Trme97332g00001 89 Gene3D - 1 80 - -
Trme97332g00001 89 FunFam heat shock 70 kDa protein-like 3 83 - -
Trme97332g00001 89 SUPERFAMILY Actin-like ATPase domain 8 78 IPR043129 -
Trme97332g00001 89 Pfam Hsp70 protein 9 78 IPR013126 GO:0005524|GO:0140662
Trme97332g00001 89 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Trme97332g00001 89 PANTHER HEAT SHOCK PROTEIN 70KDA 9 78 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme97332g00001 Trme-Chr97332 150 507 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97332g00001 1 79 Calmodulin-binding Proteins AT5G02500 64.557 5.59e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97332g00001 K03283 - vvo:131625172 124.405