Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97308g00001 CTATTAGTATCTGAATTTGCACCAAATGGTAACTTGCAATCCAAGTTACACGAAAAGCTTCCTTCAAGTCCTTCACTTTCTTGGCCTAATAGATTCAAGATTTTACTTGGAACAGCAAAGGGACTTGCACATTTGCATCATTCGTTCCGACCACCAATCATTCACTACAACATAAAACCAAGCAACATCTTACTCGATGAAAACTTCAACCCTAAGATATCGGATTTCGGGTTAGCTAGGCTTTTAACAAAGCTAGACAAGCATGTGATGAGTAACAGGTTTCAAAGTGCATTAGGTTATGTAGCACCTGAATTAGCTTGTCAAAGCTTAAGGGTCAATGAGAAATGTGATGTCTATGGTTTCGGTGTGATGATACTCGAGTTGGTGACAGGTAGAAGACCAGTGGAGTATGGTGAAGATAATGTGTTGATATTGAATGATCATGTAAGGGTTTTACTTGAACATGGTAATGTTTTGGAATGTGTTGATCCAAGTTTGATGAATGAATTTCCTGAGGATGAGGTTTTGCCCGTCTTGAAGCTTGCAATGGTGTGTACTTCTCAAATACCATCTAGTCGACCTACTATGGCTGAAGTTGTGCAAATATTGCAGGTCATTAAAACTCCTGTTCCTCAAAGGATGGAAGTGTTTTGA 654 0.3914 LLVSEFAPNGNLQSKLHEKLPSSPSLSWPNRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENFNPKISDFGLARLLTKLDKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEHGNVLECVDPSLMNEFPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMEVF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97308g00001 217 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 7 212 - -
Trme97308g00001 217 SUPERFAMILY Protein kinase-like (PK-like) 2 207 IPR011009 -
Trme97308g00001 217 Pfam Protein kinase domain 2 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme97308g00001 217 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme97308g00001 217 Gene3D Transferase(Phosphotransferase) domain 1 7 215 - -
Trme97308g00001 217 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme97308g00001 Trme-Chr97308 3 656 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97308g00001 1 214 Receptor kinase-like Gene Family AT3G28040 75.814 1.06e-113 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Trme97308g00001 Pkinase 2.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97308g00001 - - mtr:11440311 415.231