Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme972501g00001 ATGGTCCTCACAAAGATGCGAGAGGTTGCGGAGAAATTTCTAATGTCCACTGTAAAGAATGTAGTTGTTAATGTGCCTGCTTACTTCAATGATTCTCAGCGAAAAGCCACCATCGATGCTGGTACTATTGCTGGCCTTAATGTCATCCGAATAAT 155 0.4194 MVLTKMREVAEKFLMSTVKNVVVNVPAYFNDSQRKATIDAGTIAGLNVIRI 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme972501g00001 51 PANTHER HEAT SHOCK PROTEIN 70KDA 1 51 IPR013126 GO:0005524|GO:0140662
Trme972501g00001 51 FunFam heat shock 70 kDa protein-like 1 51 - -
Trme972501g00001 51 Gene3D - 1 51 - -
Trme972501g00001 51 Pfam Hsp70 protein 1 51 IPR013126 GO:0005524|GO:0140662
Trme972501g00001 51 SUPERFAMILY Actin-like ATPase domain 1 51 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme972501g00001 Trme-Chr972501 1 155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme972501g00001 1 51 Calmodulin-binding Proteins AT5G02490 78.431 1.07e-21 83.6