Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97197g00001 ATGGACAAAGCAACCTTTGAAATAGATATACCTACAGTTGAATCAGGAAAACTGATTATAAAAGAAAGACTTCAGCATAAAAGGGTACTTCTTGTACTTGACGATGTTAATGACTTGGAGCAGCTAGAGGCTTTGTGCGGAAATCCGGATTGGTTTGGTGCAGGTAGCAAAATAATCATCACGGCAAGAGATAGACATCTACTCAAGGAGCATGGWGTCAGCCATATTTATAGGGTGAAAGAATTGAAYGAAAGTGAATCGCTTGAGGTTTTGAATCGGGGTGCATTCAATCAAGCAACTTCTCGAGAAGATTTTGCTGAAATTTCCACTCAAGTAGTTGCTTATTCTAAGGGATTGCCTCTTGCTCTTGGAGTACTTGGGTGGTTTTTGAATGGAAAGGAAATGCGTGAGTGGAAGGGTGTGTTGAAGAGTCTCGAAAG 440 0.4068 MDKATFEIDIPTVESGKLIIKERLQHKRVLLVLDDVNDLEQLEALCGNPDWFGAGSKIIITARDRHLLKEHGVSHIYRVKELNESESLEVLNRGAFNQATSREDFAEISTQVVAYSKGLPLALGVLGWFLNGKEMREWKGVLKSLE 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97197g00001 146 Pfam NB-ARC domain 16 146 IPR002182 GO:0043531
Trme97197g00001 146 PRINTS Disease resistance protein signature 116 130 - -
Trme97197g00001 146 PRINTS Disease resistance protein signature 23 37 - -
Trme97197g00001 146 Gene3D - 2 76 IPR027417 -
Trme97197g00001 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 145 IPR027417 -
Trme97197g00001 146 Gene3D - 81 146 IPR042197 -
Trme97197g00001 146 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 146 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme97197g00001 Trme-Chr97197 86 525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97197g00001 19 134 WRKY Transcription Factor Family AT5G45050 39.655 8.96e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97197g00001 - - mtr:11411578 182.185