Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97188g00001 ATGGTGCGAGACAATAAGCGCTACATGGTCTCTCACACCACCAACAACAACAACACGAACAACAATCTGATCATGCCAACACAATGGTTGACACAACCTTCCTTTAGTAGGCATATCAGTATTCCTCAAGAGCAAAGGGAGAAACTTGCCACATCCTCCTCTAAAAGGCCTAGGGGTAAATTCCCGAGATCTAATAACAACCCCAAATCCCCTGTTGTAATTGAGAAAATTACGGAGAGCCCCATGAAAATGATTCTCATTGAGATCCCCGTGGGCAAAGATATTGTTGGGGCTTTAATCAACTTGGCTCAACGTCATCAATCTTGCTTAACAGTGTTGAGGGGTGATGGACATGTGTTTGGTGGAATTGTTGGAGGGAGGATTAAGGCTGCTAGTGTTGTTTTGATTACGGCAATTCTTTTGAGGAAACCAAAGTTTCATAGGTTGGTCAACATCGATGGAAATGTTTTTGAAATCGAAGAGCGTGTTACACCCAATTCCAACAACAACAACAACAACAACAA 524 0.4256 MVRDNKRYMVSHTTNNNNTNNNLIMPTQWLTQPSFSRHISIPQEQREKLATSSSKRPRGKFPRSNNNPKSPVVIEKITESPMKMILIEIPVGKDIVGALINLAQRHQSCLTVLRGDGHVFGGIVGGRIKAASVVLITAILLRKPKFHRLVNIDGNVFEIEERVTPNSNNNNNNN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97188g00001 174 MobiDBLite consensus disorder prediction 42 71 - -
Trme97188g00001 174 MobiDBLite consensus disorder prediction 1 23 - -
Trme97188g00001 174 MobiDBLite consensus disorder prediction 57 71 - -
Trme97188g00001 174 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 119 IPR014476 GO:0003680
Trme97188g00001 174 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme97188g00001 Trme-Chr97188 1 609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97188g00001 55 119 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 40.000 2.78e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97188g00001 - - psat:127121089 109.383