Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9707g00001 GGTTCGCCTGAAACCGAGTTTTTTACCGAGTATGGAGAGGCAAGTCAATACCAGGTCCAAGAAATCATTGGAAAAGGAAGCTATGGTGTTGTGTGTTCTGCAATTGACATTCATACTGGTGAAAAAGTTGCAATCAAGAAAATTAATGATGTTTTTGAGCATGTATCAGATGCCACAAGGATCCTAAGAGAAATCAAGCTCTTGCGCTTGCTCCGACATCCTGATATTGTAGAAATTAGGCATATTATGCTTCCTCCTTCCCGCCGAGAGTTCAGAGATATCTATGTTGTGTTTGAGTTGATGGAATCTGATCTGCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAGCACCACCAATTTTTCTTGTACCAACTTCTTAGAGGCCTCAAATATATACATTCAGCAAATGTGTTTCACCGTGATTTGAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAACTGAAAATATGTGATTTTGGACTTGCTCGAGTTTCATTTAATGATGCCCCATCTGCTATATTCTGGACTGACTATGTTGCAACTAGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCTGGAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTTACTGGTAGGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATATCATGACTGATTTGCTTGGCACTCCTCCTCCCGAGTCCATTGCGAGGATTCGAAATGAGAAAGCTAGAAGGTATCTTAATAGCATGCGGAAAAAGCAACCTGTTCCATTCTCCCAGAAATTTCCAAATATAGATCCTTTGGCTCTTCGTATACTGGAGCGCTTACTTGCATTTGATCCTAAAAACCGTCCATCAGCCGAAGAGGTTGGTCTCTAA 915 0.4055 GSPETEFFTEYGEASQYQVQEIIGKGSYGVVCSAIDIHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIRHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLTGRPLFPGKNVVHQLDIMTDLLGTPPPESIARIRNEKARRYLNSMRKKQPVPFSQKFPNIDPLALRILERLLAFDPKNRPSAEEVGL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9707g00001 304 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 302 - -
Trme9707g00001 304 Pfam Protein kinase domain 17 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme9707g00001 304 ProSiteProfiles Protein kinase domain profile. 17 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme9707g00001 304 Gene3D Phosphorylase Kinase; domain 1 15 100 - -
Trme9707g00001 304 ProSitePatterns Protein kinases ATP-binding region signature. 23 47 IPR017441 GO:0005524
Trme9707g00001 304 FunFam Mitogen-activated protein kinase 6 112 - -
Trme9707g00001 304 CDD STKc_TDY_MAPK 16 301 - -
Trme9707g00001 304 ProSitePatterns MAP kinase signature. 52 155 IPR003527 GO:0004707|GO:0005524|GO:0006468
Trme9707g00001 304 Gene3D Transferase(Phosphotransferase) domain 1 101 301 - -
Trme9707g00001 304 SMART serkin_6 17 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme9707g00001 304 SUPERFAMILY Protein kinase-like (PK-like) 13 302 IPR011009 -
Trme9707g00001 304 FunFam Mitogen-activated protein kinase 103 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9707g00001 Trme-Chr9707 62 1561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9707g00001 1 302 MAP Kinase Gene Family AT1G73670 87.086 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trme9707g00001 Pkinase 5.1e-66 CL0016