Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97046g00001 ATGTTGGTCTATGAGTACGTCCCAAACGGCACTTTAATGGACAGTCTTTCAGGAAAATCTGGGATATGGATGGATTGGATAAGGAGGCTCAAAGTTACATTGGGTGCTGCCAGGGGTCTGACCTATCTACATGAACTTGCTGACCCACCAATCATACACAGAGACATAAAATCAAGCAATATCTTACTTGATAATCACCTCGTCGCAAAAGTTGCTGATTTTGGTCTCTCCAAACTTCTTACTGATAGCGATAGGGGCCATGTTACTACTCAAGTCAAAGGAACAATG 288 0.4271 MLVYEYVPNGTLMDSLSGKSGIWMDWIRRLKVTLGAARGLTYLHELADPPIIHRDIKSSNILLDNHLVAKVADFGLSKLLTDSDRGHVTTQVKGTM 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97046g00001 96 Pfam Protein kinase domain 2 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme97046g00001 96 SUPERFAMILY Protein kinase-like (PK-like) 1 95 IPR011009 -
Trme97046g00001 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme97046g00001 96 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Trme97046g00001 96 FunFam Os07g0541700 protein 8 95 - -
Trme97046g00001 96 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Trme97046g00001 96 PANTHER RECEPTOR-LIKE PROTEIN 55 2 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme97046g00001 Trme-Chr97046 194 611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97046g00001 1 96 Receptor kinase-like Gene Family AT5G49760 76.042 1.67e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Trme97046g00001 Pkinase 8.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97046g00001 - - mtr:11440804 191.045