Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97015g00001 ATGAGAATTTTGCATTTTGACATAAAGCCTCATAATATTCTTCTTGATGTGAATTTCAGTCCAAAAGTTTCGGATTTTGGACTAGCAAAGTTATATCCAACTGACAATAGCATTGTGTCACTTACCGCTGCAAGAGGAACTATGGGATACATGGCACCGGAATTGTTCTATAAGAACATTGGAGGAGTATCATATAAAGCAGATGTTTATAGCTTTGGAATGTTGTTAATGGAAATGGCGAGTAGGAGAAGAAATATGAATGAGGGTGAAGATCGTAAGAGTCAAGTTTATTTCCCTTCTTGGGTTTATGACCAATTTAGCGAAGGGAAGGAAATAGAAATGGGAAATGGTACGGAAGAGGAAGAGAAGATATTGAAGAAGATGATAATAGTTGCATTATGGTGTATACAGATGAAACCAAGTGATCGTCCTTTGATGAACAAAGTGGTTGAGCTGCTTGAAGGAGATGTTGAGTCATTGGTAATGCCTCCTAAGCCATTTCAAACTCCAAAAGGAATGCCTGTACAAGGCATTGCACAATTTGGAAATCTACCTTG 557 0.3788 MRILHFDIKPHNILLDVNFSPKVSDFGLAKLYPTDNSIVSLTAARGTMGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNMNEGEDRKSQVYFPSWVYDQFSEGKEIEMGNGTEEEEKILKKMIIVALWCIQMKPSDRPLMNKVVELLEGDVESLVMPPKPFQTPKGMPVQGIAQFGNLP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97015g00001 185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 3 15 IPR008271 GO:0004672|GO:0006468
Trme97015g00001 185 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme97015g00001 185 Pfam Protein kinase domain 2 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme97015g00001 185 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 169 IPR045874 GO:0004672
Trme97015g00001 185 SUPERFAMILY Protein kinase-like (PK-like) 2 153 IPR011009 -
Trme97015g00001 185 Gene3D Transferase(Phosphotransferase) domain 1 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme97015g00001 Trme-Chr97015 113 669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97015g00001 2 167 Receptor kinase-like Gene Family AT5G38280 54.118 1.40e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trme97015g00001 Pkinase 6.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97015g00001 - - cam:101507916 349.362