Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme969907g00001 TCCACCCGCCGCCTTCCTCCTCCTTGCTGGTCCCCTGACGAAACCCTAGCTCTCATCGACTCTTACCGTGACAAATGGTACTCTCTTGGCCGTGGAAACCTAAAAGCCACTCACTGGCAAGAAGTCGCTGACGCTGTTTCTCAGCGTTGCCCTAACGCTTCTCCGTCCAAAACTCCCGTTCAATGCCGTCACAAGATGGAGAAGCTTCGTAAGCGTTATCGGACTGA 227 0.5419 STRRLPPPCWSPDETLALIDSYRDKWYSLGRGNLKATHWQEVADAVSQRCPNASPSKTPVQCRHKMEKLRKRYRT 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme969907g00001 75 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 5 75 IPR044823 -
Trme969907g00001 75 FunFam Trihelix transcription factor ASIL2 10 75 - -
Trme969907g00001 75 Gene3D - 10 75 - -
Trme969907g00001 75 ProSiteProfiles Myb-like domain profile. 10 70 IPR001005 -
Trme969907g00001 75 Pfam Myb/SANT-like DNA-binding domain 8 75 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme969907g00001 Trme-Chr969907 1 227 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme969907g00001 9 74 Trihelix Transcription Factor Family AT3G14180 40.909 1.60e-14 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trme969907g00001 Myb_DNA-bind_4 9.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme969907g00001 - - gmx:100794175 160.229