Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme96872g00001 GTTGAGCAATTGCATAGGATTTTTAAACTTTGTGGATCACCATCTGTGGACTATTGGCAAAAACTGCGGCTGCCACATTCTACAGTATTCAGGCCTCCACACCATTATAGGAAATGTATTGCCGATACATTTAAAGAATTTCCATCTGCTGCTGTGAGGCTTATAGAGACCCTACTCTCTTTAGATCCTACACTTCGAGGAACAGCAGCTGCAGCTCTGAAGAACGAGGTAAATGATTGTATACTTTGA 249 0.4177 VEQLHRIFKLCGSPSVDYWQKLRLPHSTVFRPPHHYRKCIADTFKEFPSAAVRLIETLLSLDPTLRGTAAAALKNEVNDCIL 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme96872g00001 82 Gene3D Transferase(Phosphotransferase) domain 1 1 81 - -
Trme96872g00001 82 SUPERFAMILY Protein kinase-like (PK-like) 2 75 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme96872g00001 Trme-Chr96872 230 478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme96872g00001 2 76 Core Cell Cycle Gene Families AT5G10270 36.842 5.85e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme96872g00001 - K08819 gmx:100781209 144.821