Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9679g00001 GTGAATGTGTTGACACACACAAACAAGGTGAATATAGCTCCCTGGCAGAGAAAAAACATAAATAAATTGAAGAAGGAATATGGTAAAGAAGACTATTTGGAACTCTATCGTGAAGCTTTAGATAATGTTGATGTAAAATCCAAATCTAAAGCATTGGACCATGATCAAAAGGCAGAGAATGGAGTTAACCGGATTTCACCAAGTAGCCAAGTAGAAAAGTGTATTTCATCAATATCCGAAGACTTGAGTGGCAAGGTAGAAACACAGAACACAGAACAATGTGATGATAATGGAAAGGGCTCTTGCACCTATAGAAATGTTGCTGTAAGGAACTCCTCTGAGGATGATAGTGTTAGCATAACATCATCCGCTGAAGTTTCGGATTATTCTAGGACTTCTGACCTGGAGCATCTTCAATCTGCAACCAGCTTAGCATCAAGTAATGCAAACATAAAGAAAGACAGAGTGAAGATTGATTTTTCAGATGGTAATGTGTCTGGTGATCCCAAGATTGAATCAAAACAAGGCATGGGGAGAGATTCTTTGGACATTGATAATGGAGCTGCGGCTGTCCTTGGTGGTGCTGTTTGGGACATCTTCCGCCGGCAAGATGTCCCAAAAATAATTGAGTACTTAAGAAAGCACAAGAAGGAATTTCGCCATATCAACAACAAACCTGTTGATTCAGTTATACATCCCATTCATGATCAGACTATATTCTTAAATGAGAGACATAAGAAACAGCTAAAAAGAGAATTTAATGTTGAACCATGGACTTTTGAGCAACACCTTGGTGAGGCTGTTTTCATTCCAGCAGGATGTCCTCATCAAGTGAGAAACAGACAGTCCTTTGGACTCTGA 861 0.3937 VNVLTHTNKVNIAPWQRKNINKLKKEYGKEDYLELYREALDNVDVKSKSKALDHDQKAENGVNRISPSSQVEKCISSISEDLSGKVETQNTEQCDDNGKGSCTYRNVAVRNSSEDDSVSITSSAEVSDYSRTSDLEHLQSATSLASSNANIKKDRVKIDFSDGNVSGDPKIESKQGMGRDSLDIDNGAAAVLGGAVWDIFRRQDVPKIIEYLRKHKKEFRHINNKPVDSVIHPIHDQTIFLNERHKKQLKREFNVEPWTFEQHLGEAVFIPAGCPHQVRNRQSFGL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9679g00001 286 Gene3D Cupin 111 284 - -
Trme9679g00001 286 ProSiteProfiles JmjC domain profile. 133 286 IPR003347 -
Trme9679g00001 286 SUPERFAMILY Clavaminate synthase-like 186 282 - -
Trme9679g00001 286 SMART cupin_9 133 286 IPR003347 -
Trme9679g00001 286 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 283 IPR045109 GO:0032454|GO:0033169
Trme9679g00001 286 Pfam JmjC domain, hydroxylase 193 282 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9679g00001 Trme-Chr9679 464 1631 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Trme9679g00001 JmjC 2.4e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9679g00001 K15601 - cpap:110810980 233.032