Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9678g00001 AATAAAGCAGCCATTGTTAAAGTTGGTTCTGTTCATAAGATGCTTAAGCTTATTGAATCTTCAGATGGTATTGATTCAGCGGTTTCTGAAGCGATTGTTGCGAATTTTCTTGGATTAAGTGCTTTGGATTCGAATAAACCGATAATTGGGTCTTCTGCTGCAATACCCTTTTTAGTTAGAACCCTTCAGAGTTTAGATAAGAAAAGTAGTAGAAATCAAGCTAAGCAAGATGCTCTTAGAGCACTTTACAATCTTTCAATTTTCCCAGCCAATATTCCATTCATTTTGGAAACTGATTTGGTACCGTTTTTGATAAACTCGATTGGCGACATGGAAGTAACTGAAAGAAACCTTTCAATCCTTAGCAACTTGGTATCGACTAGAGCGGGTAGAAAGGCGATAAGTAGTGTTCCTGATGCGTTTCCTATCTTGGTGGATGTGTTGAATTGGACGGATTCGCCTGAATGCCAGGAAAAGGTTTCGTACATTTTGATGGTTATGTCGCATAAATCTTATGGTGACAAGCAGGCCATGATTGAGGCTGGGATTATGTCGTCGCTCCTTGAGTTGTCGCTTATTGGTAGTACTTTGTCGCAGAATCGGGCATCAAGGCTATTGGAAATTTTGAGAATAGACAAAGGGAAACAGGTTTCTGGGAACTACGGCGGAAGTTTAGGCACAGCTGTCTCCGCCCCAATTTGCGGAACTTCATCAAGTTCAAAACCAGATGAAGGAGGAGGAAAATCATGTTTGGAAGAGGACGAAGATATGATGAGCGAGGAGAAGAAAGCAGTGAAACAATTAGTCCAATTAAGTTTACAAAACAACATGAGAAAAATTGTTAAGAGAGCCAACTTGCCTCAAGATATCGTTCCATCAGATCATTTTAAGTCACTCACTTCAAGTTCAACTTCAAAGAGCTTACCATTCTGA 933 0.3998 NKAAIVKVGSVHKMLKLIESSDGIDSAVSEAIVANFLGLSALDSNKPIIGSSAAIPFLVRTLQSLDKKSSRNQAKQDALRALYNLSIFPANIPFILETDLVPFLINSIGDMEVTERNLSILSNLVSTRAGRKAISSVPDAFPILVDVLNWTDSPECQEKVSYILMVMSHKSYGDKQAMIEAGIMSSLLELSLIGSTLSQNRASRLLEILRIDKGKQVSGNYGGSLGTAVSAPICGTSSSSKPDEGGGKSCLEEDEDMMSEEKKAVKQLVQLSLQNNMRKIVKRANLPQDIVPSDHFKSLTSSSTSKSLPF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9678g00001 310 Coils Coil 251 271 - -
Trme9678g00001 310 Gene3D - 1 220 IPR011989 -
Trme9678g00001 310 MobiDBLite consensus disorder prediction 246 261 - -
Trme9678g00001 310 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 310 - -
Trme9678g00001 310 MobiDBLite consensus disorder prediction 233 261 - -
Trme9678g00001 310 SUPERFAMILY ARM repeat 11 213 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9678g00001 Trme-Chr9678 331 1263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9678g00001 1 243 U-box Gene Family AT1G24330 30.894 2.43e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9678g00001 - - psat:127098188 514.227