Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme96702g00001 GTGGATTCAGATCCTAGGCGCGTAGATTTCAACATTATATCAGGAACATCAATGGCATGCCCTCATGTAAGTGGATTAGCGGCTTTGATCAAGTCAGTTCATCCAGAATGGAGCCCAGCCGCCATTCGATCTGCATTAATGACAACAGCCTATACAACTTACAAGAACAATCAAACATTATTGGATGGTGCAACAAAAAATCCAGCAACTCCATTTGATTTTGGTGCTGGACACGTCGACCCTGTTTTCGCAGTAAATCCTGGACTTGTTTATGATTTGACAGTGGATGACTATTTGAGCTTCCTATGTGCATTGAACTACTCAACTTCTAATATTGAAATTGTGGCGAGGAGAAAGTACACATGTGACCCAAAGAAACAATACAGTGTAACAGACNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNACATAGTGTAGAGGAGATTAATTATACGCGGACTCTTACAAATGTGGGTGCCGCCGGAACATACAAGCATCTGGTTCGAAACCAAATAACACTCGAAGTTTTGGAAGGTTGGAATGGTCTGATGGAAAAATTGTTGTTAGAAGTCCGATAG 585 0.388 VDSDPRRVDFNIISGTSMACPHVSGLAALIKSVHPEWSPAAIRSALMTTAYTTYKNNQTLLDGATKNPATPFDFGAGHVDPVFAVNPGLVYDLTVDDYLSFLCALNYSTSNIEIVARRKYTCDPKKQYSVTDXXXXXXXXXXXXXHSVEEINYTRTLTNVGAAGTYKHLVRNQITLEVLEGWNGLMEKLLLEVR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme96702g00001 194 Gene3D - 102 179 - -
Trme96702g00001 194 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 174 IPR045051 -
Trme96702g00001 194 ProSitePatterns Serine proteases, subtilase family, serine active site. 15 25 IPR023828 -
Trme96702g00001 194 Gene3D Peptidase S8/S53 domain 3 98 IPR036852 GO:0004252|GO:0006508
Trme96702g00001 194 SUPERFAMILY Subtilisin-like 7 92 IPR036852 GO:0004252|GO:0006508
Trme96702g00001 194 Pfam Subtilase family 3 76 IPR000209 GO:0006508|GO:0008236
Trme96702g00001 194 ProSiteProfiles Serine proteases, subtilase domain profile. 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme96702g00001 Trme-Chr96702 3 690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme96702g00001 3 175 Subtilisin-like Serine Gene Family AT5G67360 64.162 3.40e-70 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme96702g00001 - - vvo:131650051 263.462