Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme965g00001 ATGACAATTGGGGCCGCAGTCCTCACTCCAGCTCTCTCAGTGTTATCAGCTTCATATGGTGTTCAGCGATCCTTGTCAGAAATGGCAAGCCTATTTTCCTCGTCACACCATACTCAGGATTCTGTGTCAAATGTTCTACAAAAATATGTACCCGTCCCCTCTGCGTGTGTTATATTGATTGGCCTTTTCGTACTGCAGCCTTGCGGATCAGAGGCAATGTTTGCAGGCCTAGGCCATTTTTCCAAGAAATCAATCAAGATTACATTTATTTGCTTGATCTATCCGCTTCTTGTGATATGCTATGCGGGTCAGGCTGCGTATATCTCTAAAAATTTGCACGCTCGAGATTTTAATCATCTTAGTCAATCCGTGCCAAGTCATTCCAAACATATATTCATAGTATTATCCCTACTTTCTTCGGCTGTCGGAAGCCAAGCAACTATAACAGCGAGCTTCTCCATCATTAACCAGTGTCTGGCACTAAATTGTTTTCCTAGAGTGAAAGTCATTCACACATCAAAAACGATACACGGCCAGGTTTACATCCCAGATGTCAACTGGTTATTGATGATTTTCAGTCTATCTGTCACGGTTGGTTTCAGAGACTTGGTGAAGATTGGCAACGCAACAAGTTTGGCTATAATATGTGGAATGCTGGTGACAACTAGTCTCATGTCACTAATCATTGCTTTGTATTGGGAGAAGAATTTGATGATATCAGCATGCTTTCTGGTATGTTTTGGCCTTGTTGAGGTTGCATATCTTTCAGCATGTATGCTGCAGTTTCACAAGGGAGCTTGGTATCTACTTGTCCTTTTGGTGGTGTCGATGACAGTCATGCTTTCATGGCATTATGGAACAGTGAAGAAGTATGAGTTTGATTTGCAAAACAAGGTGTCAACTGAATGGCTAATAGATGTTAGTCCAGGCCTTGGCATTTCAAGGGTAGCTGGAATTGGCTTCATTTACACCGACATAGTAGCAGGAATCCCAGCTTTCTTTTCGCATTTTATTACAAATCTTCCTGCATTTCATCAAGTGTTGATCATGGTGTCCTTCAAGTCTATGGCGGTGCCTCATGTTCCGGAATGTGAAAGGGACACGGGTGATTTTGAGGAGAAAATCATTGGTGCTATAGGAGAATTCATTTCCATTGAACAGATGAGTGACATTGAATCAATGGTTTCGGCAGAAGAAAGAATGATGATAGTAGGAAATTCATCATCACGGGGAGATGGCAAGGCTTTAGTGCCTTTGATGAATGAAACATGCAACGAAGTGAGCATTATTAATGAAGCTCAGATTAGCCCGGTAGTAGTAATTGATGATGAAAGTGATGATAAGTTGTTGGCGAGTAGTAGTAGCTCTTGTAAAAAAAGAAAAAAAGTTAGGTTCATGTTGCCACCAGCTAGTAGTAGTAGTCCTAAAATGGAAGAATCTGTGAGGAAGGAGCTGTTGGAACTAATTGATGCAAGGGAGAGTGGCAGTGCCTATTTCTTGGGACAGTCACATTTAGTGGTGCGTGATGGCTCAAACTATCTCAAGAGATTCTTAATAATGGTTTTTCGTTTCTTTGAAAAAAATGGCAGGGAACCTCCTGTTGCTCTCAAAATCCCTCATGCTGCTCTTGTAGAAGTTG 1639 0.4155 MTIGAAVLTPALSVLSASYGVQRSLSEMASLFSSSHHTQDSVSNVLQKYVPVPSACVILIGLFVLQPCGSEAMFAGLGHFSKKSIKITFICLIYPLLVICYAGQAAYISKNLHARDFNHLSQSVPSHSKHIFIVLSLLSSAVGSQATITASFSIINQCLALNCFPRVKVIHTSKTIHGQVYIPDVNWLLMIFSLSVTVGFRDLVKIGNATSLAIICGMLVTTSLMSLIIALYWEKNLMISACFLVCFGLVEVAYLSACMLQFHKGAWYLLVLLVVSMTVMLSWHYGTVKKYEFDLQNKVSTEWLIDVSPGLGISRVAGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLIMVSFKSMAVPHVPECERDTGDFEEKIIGAIGEFISIEQMSDIESMVSAEERMMIVGNSSSRGDGKALVPLMNETCNEVSIINEAQISPVVVIDDESDDKLLASSSSSCKKRKKVRFMLPPASSSSPKMEESVRKELLELIDARESGSAYFLGQSHLVVRDGSNYLKRFLIMVFRFFEKNGREPPVALKIPHAALVEV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme965g00001 546 Pfam K+ potassium transporter 55 366 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trme965g00001 546 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 69 546 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme965g00001 Trme-Chr965 173 3272 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme965g00001 1 546 Inorganic Solute Cotransporters AT1G70300 37.838 6.03e-130 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme965g00001 K03549 K12236 gmx:100801073 748.043