Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme96421g00001 ATGATGAGGAATTTGGAGCGTAAAGAAACCGAGTACATGAGACTTCAGAGACGTAAAATTGGAATCGATGATTTTGAGCAATTAACAGTAATTGGTAAAGGTGCTTTTGGTGAGGTGAGGTTATGTCGTGCTAAAAGTACGGGGGAGATTTTTGCCATGAAGAAATTGAAGAAGTCAGAGATGCTTAGCCGTGGACAG 198 0.4091 MMRNLERKETEYMRLQRRKIGIDDFEQLTVIGKGAFGEVRLCRAKSTGEIFAMKKLKKSEMLSRGQ 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme96421g00001 66 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Trme96421g00001 66 SUPERFAMILY Protein kinase-like (PK-like) 8 63 IPR011009 -
Trme96421g00001 66 Gene3D Phosphorylase Kinase; domain 1 1 66 - -
Trme96421g00001 66 ProSiteProfiles Protein kinase domain profile. 25 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme96421g00001 66 PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme96421g00001 Trme-Chr96421 347 649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme96421g00001 1 66 AGC Kinase Gene Family AT5G09890 86.364 1.86e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Trme96421g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme96421g00001 K08790 - rcu:8278864 130.568