Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme96413g00001 TCGAAGAGCAGCTGCAAGTCTGCATCACACAGGCTTTTTAAGGATAAGGCGAAGAATCGTGTTGATGATCTGCAGNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAGTCGGAGCTCAATGAGCCTTCTCCTGCTTCTTCTTTGCAGCAAGATGGAAGTCTTGGATCATTCTCCACCGATATCTGTCGGCTTTTGCAGCTCTGCGAGGAGGAAGATGATGCCTCTAGTCCATTAGCTGCACCTAAGCCTGAACCTAATTACCAGACTNNNNNNNNNNANNNNNNNNNNANNNNNNAAGAGGGCCGGCCCCGACTATTTGGAGGCCCGGTTTGA 399 0.3885 SKSSCKSASHRLFKDKAKNRVDDLQXXXXXXXXXXXXXXXXXXXXXEEQVHQMLREWKSELNEPSPASSLQQDGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNYQTXXXXXXXXXXEGRPRLFGGPV 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme96413g00001 132 Coils Coil 47 56 - -
Trme96413g00001 132 Coils Coil 14 25 - -
Trme96413g00001 132 MobiDBLite consensus disorder prediction 35 77 - -
Trme96413g00001 132 MobiDBLite consensus disorder prediction 62 77 - -
Trme96413g00001 132 PANTHER TRANSCRIPTION FACTOR VOZ1 2 113 IPR039277 GO:0006355|GO:0048578
Trme96413g00001 132 MobiDBLite consensus disorder prediction 94 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme96413g00001 Trme-Chr96413 2 680 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme96413g00001 1 107 VOZ-9 Transcription Factor Family AT1G28520 70.093 3.75e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme96413g00001 - - gmx:100798565 165.236