Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme96406g00001 ATGCTTTTCCAGGCTCGGCCTCTGTTGATTGAAGCACTCGATAATGAGGACTTTGAAACTTTGGCGGATCCAAGACTAGGAAAGAACTACAATAGAAATGAAATGTTTAGGATGATTGAGGCTGCTGCAGCTTGNNTNNNNNNNNNNTCGGTTAAGAGGCCACGGATGAATCAGGTTATGAGAGCTTTCGATTCCATGGACGAGTCTACAGATCTGAATAATGGAATGAAACCGGGGCAGAGTTCAGTGTTCGATTCTGCACAGCAATCTGCACAGATAAGAATGTTTAGGAGAATGGCTTTTGGAAGCCAAGATAGTTC 320 0.4219 MLFQARPLLIEALDNEDFETLADPRLGKNYNRNEMFRMIEAAAAXXXXXSVKRPRMNQVMRAFDSMDESTDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDSS 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme96406g00001 107 MobiDBLite consensus disorder prediction 62 84 - -
Trme96406g00001 107 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 99 IPR047117 -
Trme96406g00001 107 MobiDBLite consensus disorder prediction 63 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme96406g00001 Trme-Chr96406 1 421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme96406g00001 1 107 Trihelix Transcription Factor Family AT5G38560 63.551 1.04e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme96406g00001 - - gmx:100790988 172.17