Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme96346g00001 TCATATGTTGCTCTCAAAATCCAGAAAAGTGCGGCCGAGTTTGTTCAAGCTGCCCTTCACGAGATCGATGTTCTTTTATCTATTGCTGACGGCGACCCATCAAATTCAAAGTTCGTTGTCCAATTGATTGATCACTTCAAGCACACAGGTCCAAATGGACAGCACCAATGCATGGTCCTTGAATTCCTTGGTGATAGCTTGCTTCGTTTGATCAGATATAACCGTTACAAAGGTCTTCCGTTGAATAAAGTTAGAGAGATCTGCAAATACGTTTTGATTGGTTTGGATTACTTGCATAGTGAACTTG 307 0.4137 SYVALKIQKSAAEFVQAALHEIDVLLSIADGDPSNSKFVVQLIDHFKHTGPNGQHQCMVLEFLGDSLLRLIRYNRYKGLPLNKVREICKYVLIGLDYLHSEL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme96346g00001 102 SUPERFAMILY Protein kinase-like (PK-like) 2 101 IPR011009 -
Trme96346g00001 102 Gene3D Transferase(Phosphotransferase) domain 1 31 101 - -
Trme96346g00001 102 Gene3D Phosphorylase Kinase; domain 1 2 62 - -
Trme96346g00001 102 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 2 102 - -
Trme96346g00001 102 ProSiteProfiles Protein kinase domain profile. 1 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme96346g00001 Trme-Chr96346 16 322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme96346g00001 2 102 EF-hand Containing Proteins AT5G22840 61.386 1.88e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Trme96346g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme96346g00001 K08832 - gmx:100784192 185.652