Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme96213g00001 | ATGGAGTTGGAGTATTTGATTGACCACGACTTGGTGACGGAGCCATATCTCAACAACGGTCTTCACCCAATTACCCAACATGTGATGAACTACCTCCGTGTAGTTGCCAAATCTCGGCAAACACTAGAGCAAGTGTTTGAGGATTCCTCACTTTCTGAGAAGATTCTTAATATTGTGGACATATTGGAGAGTAATTTGAAAGCAAAGGCCAAATGCTGCAAGGATYCTTCTTTAGGCTATATTTTTTTGATKAATAACAACACGTATATAGTTCAGATGACCAAAKATAATGAACTAGGAATCCTTTTAGGGGATGAATGGTACCRAAAACACACACTGAATATTTCGCACTACCAGAAAAYCTTGGGCACTATGCTCCCCACTTTAGTGCAAGATATTTTCCAGTTATTGTACAACAAACAACAAATTAATAAAATAGATGAGTGGAATGTGGAAGGTTCCGAAGGAACAAAGGCGTACGAAGGAGATGTGCAGGAAATAAAAGCTTCACTCTCTCAACCACCAGAAAG | 530 | 0.3906 | MELEYLIDHDLVTEPYLNNGLHPITQHVMNYLRVVAKSRQTLEQVFEDSSLSEKILNIVDILESNLKAKAKCCKDXSLGYIFLXNNNTYIVQMTKXNELGILLGDEWYXKHTLNISHYQKXLGTMLPTLVQDIFQLLYNKQQINKIDEWNVEGSEGTKAYEGDVQEIKASLSQPPE | 176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme96213g00001 | 176 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 1 | 120 | IPR004140 | GO:0000145|GO:0006887 | |
| Trme96213g00001 | 176 | SUPERFAMILY | Cullin repeat-like | 1 | 120 | IPR016159 | - | |
| Trme96213g00001 | 176 | Gene3D | Exocyst complex component Exo70 | 1 | 155 | - | - | |
| Trme96213g00001 | 176 | Pfam | Exo70 exocyst complex subunit | 2 | 122 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme96213g00001 | 1 | 119 | EXO70 exocyst subunit family | AT1G07000 | 41.406 | 1.85e-29 | 111 |