Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme961979g00001 ATGGTGCAGATTGAGTCACTGTTTGATAGTAAAGTTTGCACTGAAATGCGGGAAGCTGCAATCAGTTTGACAAAGCGACTTGCTCAGACAGCCCAAGAAACCTTTGGTGACTTTGAGGAAGCAGTTGAAAAAGATGCTACTAAAACTGCTGTGCAAGATGGAACTGTCCACCCTCTAACCAGCTATGTCATCAATTACGTGAAATTTCTCTATGAGTGA 219 0.4247 MVQIESLFDSKVCTEMREAAISLTKRLAQTAQETFGDFEEAVEKDATKTAVQDGTVHPLTSYVINYVKFLYE 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme961979g00001 72 Gene3D Exocyst complex component Exo70 1 72 - -
Trme961979g00001 72 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 71 IPR004140 GO:0000145|GO:0006887
Trme961979g00001 72 SUPERFAMILY Cullin repeat-like 2 72 IPR016159 -
Trme961979g00001 72 Pfam Exo70 exocyst complex subunit 3 72 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme961979g00001 3 72 EXO70 exocyst subunit family AT5G52340 81.429 7.11e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme961979g00001 K07195 - atr:18444439 124.79