Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme96030g00001 CTGCAGGTCATTTGGCAAGACAATATTGATCCCGACAACATGACCTATGAGGAATTACTTGAACTAGGTGAGGCCGTTGGAACTCAAAGCCGTGGTCTCACCCAAGAACAGATCTCCTTGCTTCCAGTTTCAAAGTTCAAGTGTGGGTTCTTCTTGAGGAAGAAGTCACGGAATGAACGGTAA 183 0.459 MQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISLLPVSKFKCGFFLRKKSRNER 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme96030g00001 60 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 60 IPR033276 GO:0004842|GO:0016567|GO:0046621
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme96030g00001 Trme-Chr96030 3 571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme96030g00001 2 60 C3H Transcription Factor Family AT3G63530 64.407 1.52e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme96030g00001 K19045 - gmx:100805963 117.087