Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9601g00001 ATGGAGGAGAAGTTGTCAGCAAAGCGAGATAAAACCCATGTTTTATTTGGTGGAACTAAAATATTGCAGCACTCTCCAGATAAGACCTTTCCTCTAAAAACACCTGATGGTGGCTGCTTGGCTGTTGTCCTGCGAACGGGGTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACAGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGATTGTTCATTTTATTCTTGGTTGTATTTGCTTTAATTGCGGCTGGTTATGTGCTTATTAAGGGGCTAGAAGACCCCACAAGGAGCAAGTATAAACTTATACTAAGTTGTTCTCTTATTGTTACTTCTGTGATACCTCCCGAGCTACCAATGGAATTATCAATAGCTGTTAATACTTCTCTGATTGCACTGGCACGCCGTGGAATTTTTTGCACAGAACCTTTCCGGATACCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGGACACTTACATCTGATGACATGGAATTTTCTGGAGTTGTTGGCTTGACAGAAACTACAGATTTGGAATCTGACATGAGTAGAGTGCCTATACGAACACTAGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAACTGGTATGA 648 0.4074 MEEKLSAKRDKTHVLFGGTKILQHSPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLIKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLTETTDLESDMSRVPIRTLEILASCHALVFVENKLV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9601g00001 215 Gene3D - 170 183 IPR023299 GO:0000166
Trme9601g00001 215 Gene3D - 157 169 IPR023214 -
Trme9601g00001 215 NCBIfam HAD-IC family P-type ATPase 75 183 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trme9601g00001 215 PANTHER CATION-TRANSPORTING ATPASE-RELATED 2 215 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Trme9601g00001 215 Gene3D - 61 156 - -
Trme9601g00001 215 Gene3D - 36 60 - -
Trme9601g00001 215 SUPERFAMILY Calcium ATPase, transmembrane domain M 67 154 IPR023298 -
Trme9601g00001 215 Pfam E1-E2 ATPase 3 140 - -
Trme9601g00001 215 ProSitePatterns E1-E2 ATPases phosphorylation site. 162 168 IPR018303 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9601g00001 2 215 Primary Pumps ATPases AT5G23630 88.318 3.21e-131 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9601g00001 K14950 - vum:124821481 402.519