Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme96019g00001 CTGCATGGAGTATTAATGCCCATTTTCGGGGTCTTGCTTTCTAAAATGATAAGTATTTTCTACAAGCCAGCTCATGAACTTCGTCATGATTCAAAAGTTTGGGCAATAGTGTTTGAAGCGGTTGCTGTGGCATCATTACTCATTATTCCATGTAGATTCTACTTTTTTGGTGTTGCTGGAGGTAAGTTGATCCAAAGGATCCGNAAAGTGTGTTTTGAGAAAGTAGTTCACATGAATGTAAGTTGGTTTGATGAGGCTGAGCATTCAAGCGGATCACTTGGAGCAAGGCTCTCCACTGATGCAGCTTCAGTTAGAGCTCTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATATTGCTTCAGTAATAGCTGGCTTGGTAATTGCTTTTCAAGCATGCTGGCAGCTTGCTTTTATAGTCCTTGCTTTGGCGCCTCTATTAGGACTAAATGGATATGTGCAAGTAAAAGTCTTGAAAGGATTTAGCGCAGATGCAAAGGTTTGTTAG 507 0.4142 MHGVLMPIFGVLLSKMISIFYKPAHELRHDSKVWAIVFEAVAVASLLIIPCRFYFFGVAGGKLIQRIRKVCFEKVVHMNVSWFDEAEHSSGSLGARLSTDAASVRALVGDALGLLVQNIASVIAGLVIAFQACWQLAFIVLALAPLLGLNGYVQVKVLKGFSADAKVC 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme96019g00001 168 Gene3D ABC transporter type 1, transmembrane domain 1 167 IPR036640 GO:0005524|GO:0016020
Trme96019g00001 168 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 168 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme96019g00001 168 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 33 165 IPR039421 -
Trme96019g00001 168 SUPERFAMILY ABC transporter transmembrane region 2 163 IPR036640 GO:0005524|GO:0016020
Trme96019g00001 168 Pfam ABC transporter transmembrane region 2 164 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme96019g00001 Trme-Chr96019 70 576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme96019g00001 1 166 Calmodulin-binding Proteins AT2G36910 23.121 1.13e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme96019g00001 K05658 - lja:Lj4g3v2227880.1 272.322