Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme95920g00001 GACAGTTTTCTCGGTAATCCAGGACTATGTGGATATCCGCTGCAGAAAAATTGTTCCAGTCAGATTCTGCAGAGTACTTCTAGTAAGATATCTGATGAAGAATCAAAGGGTCCTTCTAAAGAGCAGATACTTATCTATTCAGGCTATGCTGCATTAGGTGTTATCATAATCCTTTTTGTAGTGTTGAAGATATGTAGAGGAAAGAAACAAGGAAAGAAAGTTGAAGCAGAATCGAATGGTGATATCGAAAAAACGAGCTATGTTTCAAGTGAATCCAAAGCAGAAGAGGCAAGCAAATCAGGATTTTCAGTTTCTTCTGAAAATGGAATGGTCTCACAACAATCACTTATTGTTCTTGCAAGGCCAGTGGTGAATGAATTGAAAATGGAGGACTTGTTAAGAGCACCTGCTGAAATGATTGGGAGAGGAAAGAATGGAAGTCTTTATAAGGTTATGTTAACCAATGGAATAGTAGTGGTTGTGAAAAGGATTAAGGATTGGAGTATTTCTAGTGTTGAATTCAAGCAAAGAATGCAACTATTGAATCAAGCAAAGCATCCTCATGTTCTGTCACCTCTTGCTTTCTATGTTTCCAAACAAGAGAAGCTTTTGGTCTATGAATATCAACAAAATGGAAGTTTGTTCAAGCTTCTACATGGTAAATTTTAA 669 0.3677 DSFLGNPGLCGYPLQKNCSSQILQSTSSKISDEESKGPSKEQILIYSGYAALGVIIILFVVLKICRGKKQGKKVEAESNGDIEKTSYVSSESKAEEASKSGFSVSSENGMVSQQSLIVLARPVVNELKMEDLLRAPAEMIGRGKNGSLYKVMLTNGIVVVVKRIKDWSISSVEFKQRMQLLNQAKHPHVLSPLAFYVSKQEKLLVYEYQQNGSLFKLLHGKF 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme95920g00001 222 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 220 IPR046959 -
Trme95920g00001 222 Gene3D Phosphorylase Kinase; domain 1 100 208 - -
Trme95920g00001 222 SUPERFAMILY Protein kinase-like (PK-like) 138 221 IPR011009 -
Trme95920g00001 222 ProSitePatterns Protein kinases ATP-binding region signature. 140 162 IPR017441 GO:0005524
Trme95920g00001 222 ProSiteProfiles Protein kinase domain profile. 134 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme95920g00001 222 Pfam Protein kinase domain 138 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme95920g00001 Trme-Chr95920 3 671 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme95920g00001 2 220 Receptor kinase-like Gene Family AT1G60630 33.913 1.72e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme95920g00001 Pkinase 4.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme95920g00001 - - vvo:131595445 349.362