Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme95920g00001 | GACAGTTTTCTCGGTAATCCAGGACTATGTGGATATCCGCTGCAGAAAAATTGTTCCAGTCAGATTCTGCAGAGTACTTCTAGTAAGATATCTGATGAAGAATCAAAGGGTCCTTCTAAAGAGCAGATACTTATCTATTCAGGCTATGCTGCATTAGGTGTTATCATAATCCTTTTTGTAGTGTTGAAGATATGTAGAGGAAAGAAACAAGGAAAGAAAGTTGAAGCAGAATCGAATGGTGATATCGAAAAAACGAGCTATGTTTCAAGTGAATCCAAAGCAGAAGAGGCAAGCAAATCAGGATTTTCAGTTTCTTCTGAAAATGGAATGGTCTCACAACAATCACTTATTGTTCTTGCAAGGCCAGTGGTGAATGAATTGAAAATGGAGGACTTGTTAAGAGCACCTGCTGAAATGATTGGGAGAGGAAAGAATGGAAGTCTTTATAAGGTTATGTTAACCAATGGAATAGTAGTGGTTGTGAAAAGGATTAAGGATTGGAGTATTTCTAGTGTTGAATTCAAGCAAAGAATGCAACTATTGAATCAAGCAAAGCATCCTCATGTTCTGTCACCTCTTGCTTTCTATGTTTCCAAACAAGAGAAGCTTTTGGTCTATGAATATCAACAAAATGGAAGTTTGTTCAAGCTTCTACATGGTAAATTTTAA | 669 | 0.3677 | DSFLGNPGLCGYPLQKNCSSQILQSTSSKISDEESKGPSKEQILIYSGYAALGVIIILFVVLKICRGKKQGKKVEAESNGDIEKTSYVSSESKAEEASKSGFSVSSENGMVSQQSLIVLARPVVNELKMEDLLRAPAEMIGRGKNGSLYKVMLTNGIVVVVKRIKDWSISSVEFKQRMQLLNQAKHPHVLSPLAFYVSKQEKLLVYEYQQNGSLFKLLHGKF | 222 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme95920g00001 | 222 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 2 | 220 | IPR046959 | - | |
Trme95920g00001 | 222 | Gene3D | Phosphorylase Kinase; domain 1 | 100 | 208 | - | - | |
Trme95920g00001 | 222 | SUPERFAMILY | Protein kinase-like (PK-like) | 138 | 221 | IPR011009 | - | |
Trme95920g00001 | 222 | ProSitePatterns | Protein kinases ATP-binding region signature. | 140 | 162 | IPR017441 | GO:0005524 | |
Trme95920g00001 | 222 | ProSiteProfiles | Protein kinase domain profile. | 134 | 222 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trme95920g00001 | 222 | Pfam | Protein kinase domain | 138 | 219 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme95920g00001 | Trme-Chr95920 | 3 | 671 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme95920g00001 | 2 | 220 | Receptor kinase-like Gene Family | AT1G60630 | 33.913 | 1.72e-26 | 104 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Trme95920g00001 | Pkinase | 4.9e-09 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme95920g00001 | - | - | vvo:131595445 | 349.362 |