Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme95748g00001 GTCGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACATGGGTGTGGATACCAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTTTATTCCTTTGGGGTGGTACTGGTGGAGCTTGTTACTGGTAGAAAAGCTGTTGATCTCACTAGGCCCAAGGGACAACAGTGCCTTGCTGAGTGG 225 0.48 VGDFGLARWQPDGDMGVDTRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLAEW 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme95748g00001 75 PANTHER OS01G0750732 PROTEIN 1 75 - -
Trme95748g00001 75 SUPERFAMILY Protein kinase-like (PK-like) 1 64 IPR011009 -
Trme95748g00001 75 Gene3D Transferase(Phosphotransferase) domain 1 1 75 - -
Trme95748g00001 75 ProSiteProfiles Protein kinase domain profile. 1 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme95748g00001 75 Pfam Protein kinase domain 2 62 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme95748g00001 Trme-Chr95748 196 701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme95748g00001 1 75 Trihelix Transcription Factor Family AT1G68690 64.000 2.25e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Trme95748g00001 Pkinase 8.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme95748g00001 - - cam:101503019 155.992