Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme95740g00001 TTAAGTGTCGTCACAGCAGCAAGTGTTACAATCACCACTCTCGCATTCATAGGTGTTGGATTGTTTGCATTCGTCAAATACCGCCGTCGAAAGCAGAAGATTACAGCAAACTCTTCTGAAGGGAAACTAAGTCCTCAGCAGCCTAAAGAGTTATGCAGAAAAAGTCCATCTACCCTTGTTAATCTTGACTATTAYAATGGATGTTATCCAATGCCTGATGATCAAAATGCTGGGGGATTATACAGTGAATATCTTAACCAGTTTAGGTTTAATGTAGATGAAGTCGAATCTGCAACACAATATCTTTCAGAAGCAAACTTATTGTGTAAGAGCAAATTCTCAGCAATGTATAAAGGAATTCTTAGAGACGGTTCTCTTGTCGCTATAAGAAGTATTAACATGACATGCTGCAAAACCGAGGAAGCCGAATTTGTAAAGGGATTGAGCTTATTAACCTCACTTAGACATGAAAACGTTGTTAAGCTAAGAGGTTTCTGTTGCTCAAGTAGTAGAGGTGAATGTTACCTTATTTACGACTTTGCAACGATGGGCTACCTATCTCAATACCTTGACATAGAAGATAGATGTGGCCATTTGCTTGACTGGCCCAAGAGGGTTTCTATCATCAAGGGCATTGCAAAGG 643 0.395 LSVVTAASVTITTLAFIGVGLFAFVKYRRRKQKITANSSEGKLSPQQPKELCRKSPSTLVNLDYYNGCYPMPDDQNAGGLYSEYLNQFRFNVDEVESATQYLSEANLLCKSKFSAMYKGILRDGSLVAIRSINMTCCKTEEAEFVKGLSLLTSLRHENVVKLRGFCCSSSRGECYLIYDFATMGYLSQYLDIEDRCGHLLDWPKRVSIIKGIAK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme95740g00001 214 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 214 - -
Trme95740g00001 214 Gene3D Phosphorylase Kinase; domain 1 75 180 - -
Trme95740g00001 214 Pfam Protein tyrosine and serine/threonine kinase 106 213 IPR001245 GO:0004672|GO:0006468
Trme95740g00001 214 ProSiteProfiles Protein kinase domain profile. 102 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme95740g00001 214 FunFam Protein NSP-INTERACTING KINASE 2 73 180 - -
Trme95740g00001 214 SUPERFAMILY Protein kinase-like (PK-like) 78 214 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme95740g00001 Trme-Chr95740 63 705 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme95740g00001 3 214 Miscellaneous Gene Families AT4G22730 54.091 2.92e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Trme95740g00001 PK_Tyr_Ser-Thr 1.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme95740g00001 - - gmx:100777169 309.301