Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme95650g00001 | ATGGGAGACGCAATTGATTTGTCTGGGGATGGAGGAGTCATCAAGACTATTGTGAGGAAGAGCAAGTCAGATGCTGTGGCTCCCACAGAAGATTTTCCTGTTGTTGATGTACACTATGAAGGCACGCTCGCTGATACCGGTGAAGTCTTTGACACTACACATGAAGACAACACTATATTCTCCTTTGAAGTTGGAAAGGGTAGTGTTATCAAGGCTTGGGACATTGCARTCAAAACTATGAAGGTTGGAGAAATTGCAAAAATAACATGCAAGCCAGACTATGCATATGGTAGCGCAGGATCTCC | 305 | 0.4393 | MGDAIDLSGDGGVIKTIVRKSKSDAVAPTEDFPVVDVHYEGTLADTGEVFDTTHEDNTIFSFEVGKGSVIKAWDIAXKTMKVGEIAKITCKPDYAYGSAGSP | 102 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme95650g00001 | 102 | Gene3D | - | 3 | 102 | IPR046357 | GO:0003755 | |
| Trme95650g00001 | 102 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 32 | 102 | IPR001179 | GO:0003755 | |
| Trme95650g00001 | 102 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 34 | 101 | IPR001179 | GO:0003755 | |
| Trme95650g00001 | 102 | SUPERFAMILY | FKBP-like | 9 | 101 | - | - | |
| Trme95650g00001 | 102 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 9 | 102 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme95650g00001 | 1 | 102 | Calmodulin-binding Proteins | AT5G48570 | 41.176 | 1.25e-16 | 72.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme95650g00001 | K01802 | - | gmx:100815917 | 197.208 |