Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme95624g00001 ATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTACTCTCTGTAATAACATTTAGCACTGAAGAAGAAGCTATTGATCTAGCAAATGACACCCACTATGGTTTGGGGTCAGCTGTAATGTCAAATGATTTAGAAAGATGTGAACGCGTATCTAAGGCTCTACAAGCTGGAATTGTATGGATCAATTGTGCTCAACCAAGCTTCATTCAAGCTCCATGGGGAGGCATTAAACGTAGNGGTTTTGGTCGCGAATTAGGAGAATGGGGACTTGATAACTACTTGAGTGTGAAGCAAGTTACTACGTACATATCTGGTGATCAGTGGGGCTG 329 0.4164 MQIWREEVFGPVLSVITFSTEEEAIDLANDTHYGLGSAVMSNDLERCERVSKALQAGIVWINCAQPSFIQAPWGGIKRXGFGRELGEWGLDNYLSVKQVTTYISGDQWG 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme95624g00001 109 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 72 IPR016163 GO:0016620
Trme95624g00001 109 PANTHER ALDEHYDE DEHYDROGENASE 1 108 - -
Trme95624g00001 109 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 73 97 IPR016162 GO:0016491
Trme95624g00001 109 SUPERFAMILY ALDH-like 1 102 IPR016161 GO:0016491
Trme95624g00001 109 Pfam Aldehyde dehydrogenase family 1 99 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme95624g00001 Trme-Chr95624 20 648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme95624g00001 1 109 Aldehyde Dehydrogenase Gene Family AT1G74920 77.982 3.75e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme95624g00001 K00130 - gmx:100170755 207.223