Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme95453g00001 AATATCATGGAATTGGAAGGTGATCATCAAAATAATGGAATCCGAAGCAGACCCAATTTCCCTCTTCAGCTTTTAGAGAAAAAAGACAACAACATCCTAGATGTCTCCGAAGAACAACAACCTTGTTCAACCACCGCAAACGACGGCTCAGGCACCATCATCACATCAGACAACCAGAAAAAGCCAGCGCCGAAGCGGGCCTCGACGAAAGACCGGCATACAAAAGTGGACGGACGAGGCCGCCGGATCCGCATGCCGGCGGCCTGTGCAGCCAGAGTTTTCCAACTCACACGTGAGCTGGGACATAAATCCGACGGTGAGACGATTGAGTGGCTACTTCAACAGGCAGAGCCAGCTGTCATCGCCGCCACCGGTACAGGAACAATTCCGGCCAACTTCACTTCTCTTAACATCTCCCTTAGAAGCTCAGGTTCAACCATGTCAGCGCCATCACACTATTTTAGAGCTGATGATTCTAGAAGGAATAACAATATGATGGAGAATCCTTCATCTTTATCAGCAATTTTGAATTTCAACAACGTGCAAAATGCTATTCTACAAGCTAAACAAGAGCTCCCGGAAGAAAACGCCTCCGGAGG 599 0.4825 NIMELEGDHQNNGIRSRPNFPLQLLEKKDNNILDVSEEQQPCSTTANDGSGTIITSDNQKKPAPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRADDSRRNNNMMENPSSLSAILNFNNVQNAILQAKQELPEENASGG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme95453g00001 200 MobiDBLite consensus disorder prediction 37 76 - -
Trme95453g00001 200 Pfam TCP family transcription factor 68 166 IPR017887 -
Trme95453g00001 200 ProSiteProfiles TCP domain profile. 69 123 IPR017887 -
Trme95453g00001 200 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 50 166 IPR005333 GO:0003700
Trme95453g00001 200 MobiDBLite consensus disorder prediction 37 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme95453g00001 Trme-Chr95453 1 707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme95453g00001 3 138 TCP Transcription Factor Family AT1G69690 68.382 3.95e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trme95453g00001 TCP 4.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme95453g00001 - - gmx:100809966 266.929