Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9536g00001 CTTGGTCCTATTCCAAAAAAGTGGAGGGGAGTTTGTGCAAGCGGTGGTAACTTCAGTTGCAACAATAAGATCATCGGAGCACGATGGTACCCTGGTAGTGAGGGTGAGAGTGCAAGAGACCACTTTGGTCATGGAACACATGTGGCATCAATAGTAGGAGGAAGAAAGATAAAGGATGTGAGCTATCATGGTCTTGCAAAAGGCACTATAAGAGGTGGAGTCCCATCTTCAAGGATTGCTGTATACAAAGTGTGTAACCTAAAATGYCGTGATGATAATATTTTAGCAGCTTTTGATGATGCCATTGCTGATGGAGTTGACATCATTAGCATATCTCTTGGGAACAAAAATGCTGTTGAATTTCTCAAAGATGCTGTTGCTATTGGTTCTTTTCATGCCATGGAAAAAGGAATACTCACAGTGCAAGGAGCAGGCAACTCTGGTCCTAACCCAAGTACTATTTCAAGTGTAGCACCTTGGTTATTTAGTGTTGCCGCAACTACCATAGATCGTCAATTCATTGATAAACTCATTCTTGGAAATGGAAAGACTTTTATTGGGAAGACGATTAATATTGTCCCCTCAAATGGCACAAAATTTCCAATAGTTGTGTGTAATGCTACGGCTTGCCATGAAGATTATACATCCCCTGAAAAATGTTCATGTATAGACAAAAAACTAGTAAAGGGTAAGATTGTTTTGAGTGGAGTTATAGGTGGTGGAGAATTGGCTTATCCATATGGGGCAATTGGCTCAATCATTAATTTTACAAATGATGTTTCTGTTATCACCCATCGGCCTTCAATTAACTTAGATTCAAAAGACTTTGATCTTGTTCAATCTTACACTTACTCCACTAAATACCCTGTAGCTGAAATATTGAAGAGTGATGTCGTTCAAGACACCACTRCTCCTAAAATTGCATCTTTCTCTTCTCGTGGTCCAAATCCTAYTGTACCAGAAATTATGAAACCAGATATAAGTGCTCCTGGAGTCGATATCTTGGCTGCATATTCACCTAACGGACCAATCCCTGATGAGTTGATTTATCCCGGAAATGAGAAATACATTATACTATATGGTACCTCTATGGCATGTCCTCATGCTGCTGGAGTTGCCGCATATGTCAAATCATTTCATCCAGATTGGTCACCT 1155 0.3983 LGPIPKKWRGVCASGGNFSCNNKIIGARWYPGSEGESARDHFGHGTHVASIVGGRKIKDVSYHGLAKGTIRGGVPSSRIAVYKVCNLKCRDDNILAAFDDAIADGVDIISISLGNKNAVEFLKDAVAIGSFHAMEKGILTVQGAGNSGPNPSTISSVAPWLFSVAATTIDRQFIDKLILGNGKTFIGKTINIVPSNGTKFPIVVCNATACHEDYTSPEKCSCIDKKLVKGKIVLSGVIGGGELAYPYGAIGSIINFTNDVSVITHRPSINLDSKDFDLVQSYTYSTKYPVAEILKSDVVQDTTXPKIASFSSRGPNPXVPEIMKPDISAPGVDILAAYSPNGPIPDELIYPGNEKYIILYGTSMACPHAAGVAAYVKSFHPDWSP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9536g00001 385 CDD PA_subtilisin_like 177 293 - -
Trme9536g00001 385 Gene3D Peptidase S8/S53 domain 2 385 IPR036852 GO:0004252|GO:0006508
Trme9536g00001 385 ProSiteProfiles Serine proteases, subtilase domain profile. 1 385 - -
Trme9536g00001 385 Pfam Subtilase family 28 385 IPR000209 GO:0006508|GO:0008236
Trme9536g00001 385 SUPERFAMILY Subtilisin-like 14 385 IPR036852 GO:0004252|GO:0006508
Trme9536g00001 385 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 385 IPR045051 -
Trme9536g00001 385 ProSitePatterns Serine proteases, subtilase family, serine active site. 361 371 IPR023828 -
Trme9536g00001 385 Gene3D - 170 300 - -
Trme9536g00001 385 ProSitePatterns Serine proteases, subtilase family, histidine active site. 44 54 IPR022398 -
Trme9536g00001 385 PRINTS Subtilisin serine protease family (S8) signature 40 53 IPR015500 -
Trme9536g00001 385 PRINTS Subtilisin serine protease family (S8) signature 360 376 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9536g00001 Trme-Chr9536 598 1752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9536g00001 1 385 Subtilisin-like Serine Gene Family AT3G46850 53.046 2.42e-134 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9536g00001 - - psat:127076787 458.373