Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9526g00001 AATTGTTTACATTTCTCGGTGATTTCTGAAGCAAATGAAGATCAATTGCCGGAAGTGGAATTTGATCCGGAAGACGCGGTGGCACTTCCGTTTTCTTCCGGCACCACCGGATTACCTAAAGGAAAACATAAAGTGACGGTGGCGATGGTTGTTCCGCCGTTAGTTTTGGCGTTAGTGAAGAATCCTATGGTGGCGGAGTTTGATCTTAGTTCGATAAGGTTGGTGCGTTCAGGAGCTGCACCGTTAGGGAAGGAGCTTGAAGAAATGCTTCATAACCGAATTCCTCAAGCCGTTTTGGGACAGTTTACAGCAACAAATCCATACGCAGTTTACAGCAACAATTTTATAAGAGAGATGCTATTTGTTAAATTGTTATGA 378 0.4339 NCLHFSVISEANEDQLPEVEFDPEDAVALPFSSGTTGLPKGKHKVTVAMVVPPLVLALVKNPMVAEFDLSSIRLVRSGAAPLGKELEEMLHNRIPQAVLGQFTATNPYAVYSNNFIREMLFVKLL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9526g00001 125 ProSitePatterns Putative AMP-binding domain signature. 29 40 IPR020845 -
Trme9526g00001 125 SUPERFAMILY Acetyl-CoA synthetase-like 9 105 - -
Trme9526g00001 125 Gene3D - 42 105 - -
Trme9526g00001 125 Gene3D - 1 41 - -
Trme9526g00001 125 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 42 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9526g00001 Trme-Chr9526 2 1002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9526g00001 1 82 Monolignol Biosynthesis Gene Families AT1G65060 38.614 7.20e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9526g00001 K01904 - rcu:8280463 90.1225