Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme95184g00001 ATGAGTGGATGTGCCTGTGTTCTTCGAGATGGTAGGTGGAATGAACAAGATGCCGCTGTCCTGGTCCCCGGTGACATCATTAGCATCAAACTTGGAGATATTGTTGCAGCAGATGCGCGTCTTCTTGACGGGGATCCTTTAAAAATTGATCAGTCTGCACTCACAGGTGAGTCCCTGCCGGTGACAAAGGGCCCCGGCGATGGTGTGTATTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAG 244 0.5041 MSGCACVLRDGRWNEQDAAVLVPGDIISIKLGDIVAADARLLDGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIE 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme95184g00001 81 SUPERFAMILY Calcium ATPase, transduction domain A 4 80 IPR008250 -
Trme95184g00001 81 Gene3D - 5 81 - -
Trme95184g00001 81 FunFam Plasma membrane ATPase 4 81 - -
Trme95184g00001 81 Pfam E1-E2 ATPase 6 80 - -
Trme95184g00001 81 MobiDBLite consensus disorder prediction 54 81 - -
Trme95184g00001 81 PANTHER CALCIUM-TRANSPORTING ATPASE 5 81 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme95184g00001 5 81 Primary Pumps ATPases AT5G62670 90.909 2.55e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme95184g00001 K01535 - fve:101304385 149.443