Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme95093g00001 ATGGAACCAGTAAGGAAGTTGGAACTGCTGATATCAATCTTAGTATTTGTAATGGCTGCATGTTTCTTCGGAGAAATGAGCTACGTAAAACCCCCTGCTTCTGGTGTTGTCGAGGGAATGTTTGTCCCTAAACTCAACGGAAATGGTGCCGTAGCCGATGCTATTGCCCTTTTGGGAGCCCTTATCATGCCGCACAATCTTTTCCTCCACTCTGCTTTGGTTCTGTCTAGAAAAATACCTGGTTCTAAGCGCGGCATCAAT 261 0.4559 MEPVRKLELLISILVFVMAACFFGEMSYVKPPASGVVEGMFVPKLNGNGAVADAIALLGALIMPHNLFLHSALVLSRKIPGSKRGIN 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme95093g00001 87 PRINTS Natural resistance-associated macrophage protein signature 54 77 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme95093g00001 87 PRINTS Natural resistance-associated macrophage protein signature 4 25 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme95093g00001 87 Pfam Natural resistance-associated macrophage protein 4 79 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme95093g00001 87 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 4 86 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme95093g00001 87 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme95093g00001 Trme-Chr95093 8 453 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme95093g00001 4 86 Inorganic Solute Cotransporters AT1G80830 66.265 4.11e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme95093g00001 K21398 - csav:115718649 149.443