Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme95055g00001 CAAATGGAGGAGCAGTTCAAGACACTGATTGTTCTGTCACACTATTTGGAGACTGGAAGGTTTCGTCAGTTCTGGGATGAAGCAGCAAAAAGTCGTCATATAGTTGAAGCTGTGCCTGGATTTGAGCAGGCAATCCAAGACTATGCAATTCATGTACTATCCTTGACTTACCAAAAGATTCCCAGAACTGTGCTTGCTGAGGTATGCTTTTAG 213 0.4319 QMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQDYAIHVLSLTYQKIPRTVLAEVCF 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme95055g00001 70 Gene3D - 30 69 IPR036388 -
Trme95055g00001 70 SUPERFAMILY "Winged helix" DNA-binding domain 39 68 IPR036390 -
Trme95055g00001 70 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 1 68 IPR009374 GO:0003743|GO:0005737|GO:0005852
Trme95055g00001 70 Pfam CSN8/PSMD8/EIF3K family 4 67 IPR033464 -
Trme95055g00001 70 SUPERFAMILY ARM repeat 1 37 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme95055g00001 1 67 Eukaryotic Initiation Factors Gene Family AT4G33250 85.075 1.24e-38 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme95055g00001 K15028 - csav:115707422 133.265