Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme95043g00001 TTTGTCTGCCACAGACAAGGGTTTAGGGAGGATAGAGGTTTAACAATAGAAAATCGTAAGCGCGAGCGTAAACCCGAGACTCGGTCTGGATGTGAAGCGAAATTTAGAGTTCATATAGATATTTTATCACAACGTTGGCAGATAACTGTTTTTACAGATCAACATAACCATGATCTTTTGGATGAAAAGTACTGTGGAATGCTTCCTGCACATCGAAGAATGAAAGAGTCAGATACAGTGCAGATGAACGATATGTTGAAGGGTGGTATAGGTCCGTCTCAATTCTATGCTTCTATGGCGAACCAAGCAGGAGGTTACGAAAACATAGGGTTTCGTAGGAAGGATATATATAATCAGATAGGAAAACAACGCCGTTTGAAACATTGTGATGGTAAAAATGCTTTACATTATCTTCGTGGGCTGGCATCCGATGACCCGATGATGTTTTATCGCCACACCGTCGATGGCGAAGGCAGGCTTGAACACCTGTTTTGGTGTGATGGTATTAGCCAAATGGATTACCAAGTTTATGGGGATGTGTTGGCATTTGATGCAACCTATGGAAGAAATAAATATCACTGCCCCTTAGTGGTGTTTTCTGGTGTTAATAACCACAATAACAATGTTATATTTGCCGGTGCTATTGTTGCAAATGAAAAAGAAGAAACTTATGTGTGGGTTCTTGAACAATTTTTGGAAGCAATGTCAG 709 0.4048 FVCHRQGFREDRGLTIENRKRERKPETRSGCEAKFRVHIDILSQRWQITVFTDQHNHDLLDEKYCGMLPAHRRMKESDTVQMNDMLKGGIGPSQFYASMANQAGGYENIGFRRKDIYNQIGKQRRLKHCDGKNALHYLRGLASDDPMMFYRHTVDGEGRLEHLFWCDGISQMDYQVYGDVLAFDATYGRNKYHCPLVVFSGVNNHNNNVIFAGAIVANEKEETYVWVLEQFLEAMS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme95043g00001 236 Pfam MULE transposase domain 180 235 IPR018289 -
Trme95043g00001 236 PANTHER OS01G0519700 PROTEIN 1 235 - -
Trme95043g00001 236 Pfam FAR1 DNA-binding domain 1 60 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme95043g00001 Trme-Chr95043 2 710 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme95043g00001 FAR1 1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme95043g00001 - - tpra:123913749 484.567