Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme94776g00001 ATGGTTAGAATGCATGCAATACTTTGTACTTTGGTTCTTTTTATTCTCTCAGTTTCAACATTGACATCTTCAAAATCTTTGGAGTTTGGTTTCTATAAAACAACATGTCCATCCGCTGAGGCAATTGTGAGAAGAGCTGTAAACAAAGCCGTTTCACTCAACCCGGGGATTGCTGCTGGTTTGATTAGATTGCATTTTCATGRTTGTTTTGTTAGGGGATGCGATGGTTCTGTATTATTAGAAACCACACCAGRTAAACCATCTGAGAAAGACCATCCTGCAAACAATCCAAGTTTACGCGGCTTTGAGGTCATCAATGAAGCTAAGGCACAAATAGAAGCTGCATGTCCCAAAACAGTGTCGTGTGCAGATATTCTTGCTTTCGCGGCTCGGGATAGTACTCGCAAAGTTAGTGGTGGTATATACTACTCAGTACCATCAGGACGCAGAGATGGTCGAATCTCTATCTTCGACGAAGTCACA 483 0.4161 MVRMHAILCTLVLFILSVSTLTSSKSLEFGFYKTTCPSAEAIVRRAVNKAVSLNPGIAAGLIRLHFHXCFVRGCDGSVLLETTPXKPSEKDHPANNPSLRGFEVINEAKAQIEAACPKTVSCADILAFAARDSTRKVSGGIYYSVPSGRRDGRISIFDEVT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme94776g00001 161 FunFam Peroxidase 30 161 - -
Trme94776g00001 161 Pfam Peroxidase 43 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 ProSiteProfiles Plant heme peroxidase family profile. 26 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Trme94776g00001 161 SUPERFAMILY Heme-dependent peroxidases 27 159 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 PANTHER PEROXIDASE 25-RELATED 14 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme94776g00001 161 Gene3D - 26 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme94776g00001 Trme-Chr94776 1 483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme94776g00001 11 161 Peroxidase AT5G39580 49.669 6.66e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme94776g00001 K00430 - pvy:116139230 224.557