Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme947271g00001 GAGTGGAAAGTCAATTTACCTGCTGAAGAAATTCCATCGGAGCTTCCCGAGCCTTCCCTGGGAATTAACTTTGCTAGGCCTGGAATGCAAAAAACAGATTGGCTTTCCTTAGTTGCTGCGCATAGCGATTCATGGTTATTTGGCGTTGCATTCCATTATGGTGGTGAATTTGGGTTTAACAAATCTGACAGGTATTTCATGTATTAA 207 0.4203 EWKVNLPAEEIPSELPEPSLGINFARPGMQKTDWLSLVAAHSDSWLFGVAFHYGGEFGFNKSDRYFMY 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme947271g00001 68 PANTHER CPG BINDING PROTEIN 1 65 IPR045104 GO:0006355|GO:0042393
Trme947271g00001 68 Pfam Alfin 1 65 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme947271g00001 Trme-Chr947271 2 208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme947271g00001 2 68 Alfin-like Transcription Factor Family AT2G02470 65.672 5.32e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme947271g00001 K26274 - jre:109005310 105.531