Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme94715g00001 CATGGAGGGACTGGTCTTGGTCTTTGCATTGTTAGGAACTTGGTTAATAAGATGGGTGGAGAAATCAAGGTTACCAAAAAGGAGGGNCAAGGAACATTGATGAGATTATGCTTGCTTCTCAGTGCACCAATGGATGTCTCGGAACAACATTGTGATGTAAATTTGACAGACAATGGCTTAGTGGTGAGTAAATCACTTTTCTTGGCAAATCATTCTTTAAAATAA 225 0.3911 HGGTGLGLCIVRNLVNKMGGEIKVTKKEGQGTLMRLCLLLSAPMDVSEQHCDVNLTDNGLVVSKSLFLANHSLK 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme94715g00001 74 PRINTS Bacterial sensor protein C-terminal signature 26 39 IPR004358 GO:0016310|GO:0016772
Trme94715g00001 74 PRINTS Bacterial sensor protein C-terminal signature 2 20 IPR004358 GO:0016310|GO:0016772
Trme94715g00001 74 Gene3D - 1 53 IPR036890 -
Trme94715g00001 74 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 48 - -
Trme94715g00001 74 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2 38 IPR036890 -
Trme94715g00001 74 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1 40 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme94715g00001 Trme-Chr94715 190 632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme94715g00001 1 67 Histidine Kinase Gene Family AT2G17820 64.179 3.62e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme94715g00001 - - vra:106777758 114.775